Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq787 89.7 5e-13 seq269 82.4 8e-11 >seq787 Length=7589 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/173 (74%), Gaps = 12/173 (7%) Strand=Plus/Plus Query 116593 CCAAGCCCAAGCCCTGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCA 116652 ||||| ||| ||||| | ||||||||||||||| || | || || |||||||| Sbjct 4605 CCAAGAACAACGGCTGCCCGGTCGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGG 4664 Query 116653 CCTA--CG-TCATGGGCATC-ACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAG 116708 |||| || ||| | || | ||||||||| ||| || ||||| ||||| |||||||| Sbjct 4665 CCTATTCGCTCAAGATCACCGACCTCGATC--CCC--TCCAGTACAACCTGCTGTTCGAG 4720 Query 116709 CGCTTTATCAACCCGGACCGC--CCCGACTTCCCCGACATCGACGTCGACTTC 116759 ||||| | |||||||| ||| ||| | || ||| ||||| |||||||| Sbjct 4721 CGCTTCCTGAACCCGGAGCGCGTGTCGA--TGCCGGACTTCGACATCGACTTC 4771 >seq269 Length=22278 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 94073 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 94132 ||||| || | |||| ||| || |||| || ||||||| || ||||||||||||||||| Sbjct 21219 CGGGGAGTGGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA 21160 Query 94133 TCCTGTCACCCCGAC 94147 ||||||| ||||||| Sbjct 21159 TCCTGTCTCCCCGAC 21145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499379204374000