Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2726 107 1e-18 >seq2726 Length=527079 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || |||||||| || |||||||| || | | | || || | ||| Sbjct 136534 TGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGC 136593 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | |||||||||||||| || ||||||||||| || || ||||||| Sbjct 136594 TTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTG 136653 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 | |||||| | || || || ||| ||| || || || ||||| ||||| || ||| Sbjct 136654 GTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTC 136713 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || |||||||||||| Sbjct 136714 AGGGTTTTCACGAAAATTTGCATA 136737 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| || || || ||||| ||||| ||||| ||| | | |||| || Sbjct 136755 AACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTC 136814 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||| ||| | ||||||||||| ||||| ||||| ||||| ||||| Sbjct 136815 GAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 136874 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| ||| |||| || | || || ||||| || || || | ||| ||||| || Sbjct 136875 AATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTT 136934 Query 15334 ACCTGTCAGAGTTTTTAC 15351 || || ||||| || || Sbjct 136935 TCCGGTAAGAGTCTTGAC 136952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362165626768575