Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq2726 104 2e-17 >seq2726 Length=527079 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || | |||||| |||||||| || || ||||| ||||| ||||| ||||||||| Sbjct 136281 ACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGA 136340 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | || |||| || | || ||||| ||||| || | ||||||||||| | || Sbjct 136341 AAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 136400 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAG-CAACAGTATCTGCCGGCTCCA 44072 | ||||||||||||| || | ||||| | | ||| | | | || || | | ||| | Sbjct 136401 AATACCTTCTTTATCTTGAA-TCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAA 136459 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | ||| || ||||| || || | || ||||| || || ||||| Sbjct 136460 CTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 ||||||||||||||| ||||| | | ||| |||| || | ||| ||||| ||||| Sbjct 136545 CTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAA 136604 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 ||||| ||||| || || | || | ||||| |||||| |||||| ||| || | Sbjct 136605 AATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTGGTTTTTACATT 136664 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | || || | | || || || | ||||| ||||| ||||| | || ||||| Sbjct 136665 GTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCAC 136724 Query 44110 AAATATTTGCAT 44121 || |||||||| Sbjct 136725 GAAAATTTGCAT 136736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354764304155100