Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03]
3,075 sequences; 30,376,016 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq2726 104 2e-17
>seq2726
Length=527079
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| || | |||||| |||||||| || || ||||| ||||| ||||| |||||||||
Sbjct 136281 ACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGA 136340
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| || |||| || | || ||||| ||||| || | ||||||||||| | ||
Sbjct 136341 AAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 136400
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAG-CAACAGTATCTGCCGGCTCCA 44072
| ||||||||||||| || | ||||| | | ||| | | | || || | | ||| |
Sbjct 136401 AATACCTTCTTTATCTTGAA-TCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAA 136459
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || | ||| || ||||| || || | || ||||| || || |||||
Sbjct 136460 CTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989
||||||||||||||| ||||| | | ||| |||| || | ||| ||||| |||||
Sbjct 136545 CTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAA 136604
Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049
||||| ||||| || || | || | ||||| |||||| |||||| ||| || |
Sbjct 136605 AATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTGGTTTTTACATT 136664
Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109
| | || || | | || || || | ||||| ||||| ||||| | || |||||
Sbjct 136665 GTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCAC 136724
Query 44110 AAATATTTGCAT 44121
|| ||||||||
Sbjct 136725 GAAAATTTGCAT 136736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354764304155100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |