Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2726 116 9e-21 >seq2726 Length=527079 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 |||||||||||| ||||| || || || || | || ||||| || || ||||| ||||| Sbjct 136317 TTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAA 136376 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || || | || || || || || || ||||||||||| |||||||||| || ||||| Sbjct 136377 GATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTTGTCTTAACATT 136436 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | || || || || || || || || ||||| |||||||| || Sbjct 136437 GTCGATTGTGTCCGATGACTCAACTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCAC 136496 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 136497 GAAAATCTGCAT 136508 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | |||||||| || ||||| ||||| ||||| ||||| | ||||| Sbjct 136752 AAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTC 136811 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || ||||| | | || || |||||||| || ||||| || || Sbjct 136812 CTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTC 136871 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || || || || | ||||| | || ||||| || || || || Sbjct 136872 CTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGT 136931 Query 104527 CTTACCAGTAAGTGTTTTTAC 104547 ||| || ||||| || || || Sbjct 136932 CTTTCCGGTAAGAGTCTTGAC 136952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151353036702100