Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_005345.2 Length=49220 Score E Sequences producing significant alignments: (Bits) Value seq2286 174 5e-39 >seq2286 Length=905 Score = 174 bits (192), Expect = 5e-39 Identities = 339/489 (69%), Gaps = 19/489 (4%) Strand=Plus/Minus Query 45999 TCGCCGGGTACGACATCCCTCAGGGCTCGCCGACCCGGCACCCCGACGAGCTCGCCGACG 46058 ||||||| ||||||||| | |||| | ||||||| || | | || | ||| | |||| Sbjct 476 TCGCCGGCTACGACATCGCCCAGGCCCCGCCGACGCGCCCGCTCGCCCTGCT-GAAGACG 418 Query 46059 -CCGTCGGCACGGCTGTGCAGTGGCGCCTCGGCGCGAAGTATGGCCGGATCGCCGCCATC 46117 |||||| | | | || | ||| | ||||| |||| | ||| |||||| || | Sbjct 417 GCCGTCGCCGCATCAGTCGACCTCCGCGTTGGCGCCCAGTACGCCCGCATCGCC--CAGC 360 Query 46118 ATTCCCAGTG--TCCTCGCCGACACGATC-CGCTACGTCCACACCGCCCCCGCAAGCGAG 46174 | ||| | ||||| | ||| || || ||| || ||||| || |||| || | Sbjct 359 AGGCCCCGGCCCTCCTCACGGACGCGCTCGCGC-ACCTCCACCAGGCGCCCGGCCCCG-G 302 Query 46175 CATGCTGCCGCCGCCCGGCTACTGGCCTCGGCCGCCCGTACCGCCGACGCTATCGCCTAC 46234 || | || ||| || ||| || ||||| || | |||||||| |||||||| Sbjct 301 CACGGCGC----GCCTGG----TGGTGTCCGCCGCGCGCTCAGCCGACGCCGTCGCCTAC 250 Query 46235 AAGTACGGCGCGAACGACCTTTCCGCCCGGTTGATCGACGTCCTGCGTTGGGCCGCTGCC 46294 ||| ||||||| ||||||| |||||||| | ||||| || |||| |||||| | ||| Sbjct 249 AAGAGCGGCGCGCACGACCTATCCGCCCGCCTCGTCGACCTCATGCGCTGGGCCTCCGCC 190 Query 46295 CGGTCCGCCGATCCGCTCGTCGAGGCCACCGCCGCGTATGTGCGCACAGAAACGTTCTTC 46354 || ||| || || ||||| || |||||| || || || ||||| || || |||||| Sbjct 189 TGGGCCGAGGACCCCCTCGTGGACTCCACCGTGGCCTACGTCCGCACCGAGACCTTCTTC 130 Query 46355 GCCGCCCGAGCGCACGCTGTCGGCCTCGCG-GCGCTGGAGCAGGCGATCGAGCGCACGCC 46413 ||||| || |||||| | |||||| ||| || || ||| || |||| | | | Sbjct 129 GCCGCGCGCGCGCACCGCGCCGGCCT-GCGCGCCCTCGAGACCGCCCTCGACGGTGCATC 71 Query 46414 GGCGCCGACAAGCCGTACCGAGGCCGCCGCGCGTGGCGCGCTCCACATGCGGGCCGCTGT 46473 |||||||| |||| ||| | || | || ||||| ||||||||| |||| || || Sbjct 70 AGCGCCGACGAGCCCGGTCGACACAGCAGTCCGCGGCGCCCTCCACATGAGGGCTGCCGT 11 Query 46474 CATCGCCGG 46482 ||||||||| Sbjct 10 CATCGCCGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157376653083300