Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2550 264 1e-65 seq2473 107 2e-18 >seq2550 Length=338734 Score = 264 bits (292), Expect = 1e-65 Identities = 599/897 (67%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || |||||||| || | |||| ||| || || |||| |||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| | || ||||||||||| || | ||| || |||||||||| | || Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 ||||| | || ||| ||| || ||||| ||||| |||||| || || | | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 ||||| |||||||| ||||| | ||| || || | | || ||||||||||| || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 ||||| | ||||| |||||| || ||| | || | | ||| || ||||| ||||| || Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 | ||||| || |||| |||||| ||| |||| || ||| | | ||||| Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412 || || || || | || || || | || || || | ||||| || ||||| || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63472 || ||||| ||| |||| | | |||||||| || |||||| | | |||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532 || || || | ||| || ||||| ||||| || |||| | || | | ||| || ||| Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 63533 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63592 ||||| || || |||||| | ||||||||| ||||| |||||||| | |||||| Sbjct 315094 TCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGT 315153 Query 63593 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63652 || || | ||| | | ||| ||| ||| | || || || | || | || || Sbjct 315154 TGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCTTG 315213 Query 63653 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 63712 || |||||||| | ||| ||| || || || || | ||| ||||||| |||| || Sbjct 315214 AATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCTCA 315273 Query 63713 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGG---AAAATGTTTCCCA 63769 || ||| |||| | || ||| | ||||| || || | | | || Sbjct 315274 GCATGTTTCATAACAATTTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT---G 315330 Query 63770 TTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGT 63828 ||||| || ||| ||| | | | | || || || || || | ||| | || || || Sbjct 315331 TTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAAC-GGACGAGAATTGCTTCTTCGT 315389 Query 63829 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 | ||| || || || |||||||||||||| || || ||||| || ||||| ||||| Sbjct 315390 CTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 Score = 86.0 bits (94), Expect = 8e-12 Identities = 186/278 (67%), Gaps = 3/278 (1%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||| ||||| || || || || | ||||||| ||||||||||| || || || | | Sbjct 313348 GTGAACTGAATTGGCGCAGAAGCTGCCATCGTACGGAGATAGTACATGCCTGTCTTCAAA 313407 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || || ||||||| ||| ||||| || || | |||| | || || | Sbjct 313408 CCAAGCTTCCATCCCGCAAAGTGCATGCTAGTGATTTTGCCCATGGTAGGTTCCTTGAGG 313467 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || || || | |||||| || || ||||| || |||| || ||||||| || ||| Sbjct 313468 TGAATGTTGAGAGATTGGGACTGGTCAATGAATGCACCCCGATCGGCAGCCAGTTGAATA 313527 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || |||||| || ||||| | || || || | ||||||||| | || | | Sbjct 313528 ATGGTTCTTTGTGAGATCTCCCATACTGTCTTGTAGAGAGCTTTAATATCTGCAGGGATG 313587 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAAT 62124 |||| | ||||| | || ||||| || || || || Sbjct 313588 TTTGGAATGTTCTGGACCGAGCCACCTTCAGCGATGAT 313625 >seq2473 Length=337605 Score = 107 bits (118), Expect = 2e-18 Identities = 298/455 (65%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 32354 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 32413 || |||||| || || ||||| ||||| ||||| || || || || || || ||||| Sbjct 140623 AGCCATAACACCAGCCTTCTGGTAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACC 140564 Query 32414 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAA 32473 | | || ||||| ||||| || |||||||| || || ||||||| | ||||| Sbjct 140563 AGCCAGCGAGATATTGTCCATAAAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTT 140504 Query 32474 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 32533 || | | || ||| | || || || || || || ||| ||| | | | Sbjct 140503 GCCAAGAGCCACAAGCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGA 140444 Query 32534 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 32593 |||||||| | || | || || || | || | ||||| | ||||| || Sbjct 140443 GTTCATTCCAAGCAGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAAC 140384 Query 32594 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT--A 32651 || ||||| ||||| | | || | | ||| || ||| || |||| | Sbjct 140383 TGCCTCTGTGATAATGGCTTCAACGGCCTGGGGACTGGGCCGATG--ATGCATGTGAGAA 140326 Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || || || || ||| |||||||| || | | || |||||||| ||| Sbjct 140325 AACAGCAGGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGAA 140266 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || || ||||| || || ||||| || ||||| || ||||| || || || || Sbjct 140265 AAGGTAAGACCAGGCATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCCG 140206 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAAT 32806 ||||||||||| || || || ||||||||||| Sbjct 140205 CTGAAGAAAATTCCCTCGACAGCAGCAAAGGCAAT 140171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633607644770000