Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2473 129 7e-25 >seq2473 Length=337605 Score = 129 bits (142), Expect = 7e-25 Identities = 201/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || || | ||||| || | || ||||||| ||||||||| || ||| Sbjct 139983 ATGTACGTGTCAATGAGGAGAGAGTATGTCTCGGAATGGATATTCTCCATCATGATCTGG 139924 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 |||||||| || || | ||| || | ||||| ||||| |||||||| || ||| Sbjct 139923 AATCCGTAAAAGCAACGAGCCTCTGGAATCTGAACTTCAGCGCTGAATCTCTCGACAAGA 139864 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || |||||||| || || || || |||| | | || || | Sbjct 139863 TTCTCATTGACGATGCCATCGGAGGCGGCGAAGAAGGCCAGGACGCGAGAGATGAAGTAG 139804 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||||| || || | | | | ||| || |||||||| || | ||||| |||| Sbjct 139803 CGTTCATCGTCGTTCAGTCGATGGTTCCAGTCATGGAGATCTTTGGACAAATCGATTTCT 139744 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || ||||||| || |||||||| |||||||||||||| | ||| || Sbjct 139743 TCAGCAGTCCAGAAGGATGCTTCGGCTTTTTTGTACATTTGCCAAAT 139697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556839395663000