Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2726 145 6e-30 seq1061 87.8 2e-12 >seq2726 Length=527079 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| | ||||| ||||| | || | ||||| ||| || || Sbjct 136736 ATGCAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCC 136677 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| ||||||||||| ||||| || ||||| || |||||| Sbjct 136676 GACACAATCGACAATGTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATCAA 136617 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || |||||||| || || | |||||| ||| || |||| |||||||| Sbjct 136616 CAACGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAAT 136557 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| || || | || | || | || ||||| || ||| Sbjct 136556 ATTCAAAAAGAGTCGACTCTGCACCTTGTCCTTCGCTTGCGTGGTGGT 136509 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| | || || |||||| |||| || ||||| || | | Sbjct 136508 ATGCAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCG 136449 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || ||| |||||||| || || ||||||||||| || || Sbjct 136448 GACACAATCGACAATGTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAG 136389 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| |||||||| || ||| | || ||| ||| || | |||||||| ||| Sbjct 136388 CAACGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAAC 136329 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| |||||| ||| | || || || ||| ||||||| || ||| Sbjct 136328 ATTCAGAAAGAAAGCACTCTGCACTTGGTGTTGAGATTGCGTGGTGGT 136281 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | ||||| || || |||| ||||| ||||| | | ||||| | ||| Sbjct 136952 GTCAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCGAC 136893 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | | || || ||||| |||||||| || ||||| || || || |||||| | || Sbjct 136892 AACGTGAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGATT 136833 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| ||| | ||||| |||||| |||| ||||| ||||||||||| ||| Sbjct 136832 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGGAA 136773 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || | ||| | ||| | || | ||||| ||| Sbjct 136772 TCTACTCTTCATCTTGTTCTTCGTCTCCGCGGTGGT 136737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| | | Sbjct 137265 ATGCAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCTAGT 137206 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || |||||||||||||| || || || || || Sbjct 137205 GACACTATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 137146 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || |||||| | || ||| || ||| | || || |||||| Sbjct 137145 CAACGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTACAAC 137086 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | || || ||| | || | || || ||| Sbjct 137085 ATTCAGAAGGAGTCTACCCTTCACTTGGTTCTTCGCCTCCGTGGCGGT 137038 >seq1061 Length=321426 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| ||||| || || || || |||||||| || || || || ||| | || Sbjct 107848 AGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTCGA 107789 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| |||||| | || |||||||||||||| || || |||||| Sbjct 107788 GGACGGCCGCACTCTTTCTGATTACAACATTCAGAAGGAGTCCACC 107743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419712270037375