Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2264 114 3e-20 seq1834 89.7 1e-12 seq2759 86.0 1e-11 seq315 84.2 4e-11 >seq2264 Length=350467 Score = 114 bits (126), Expect = 3e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || || |||| |||||||| ||||| ||||| ||||| || ||||| |||| || || Sbjct 252315 TCCCGTATTGCCGTCATTGGTCCCAACGGTGCTGGTAAATCCACCCTTGTCAACATCTTG 252374 Query 280221 ACTGGCGAGACCCAGGCCA-CTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| || || || ||| || ||| ||| | ||||| ||||| || || || Sbjct 252375 ACTGGTGA-ACTCATCCCAACTTCGGGTGACGTCTACCAGCATGAGAACATTCGTATTGC 252433 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||||||| || ||||| |||||| |||||| |||||| | | Sbjct 252434 CTACATCAAGCAGCACGCTTTCGCACATATCGATAACCACTTGGACAAGACTCCCTCCGA 252493 Query 280340 ATACATTCAGTGGCG 280354 ||||||||||||||| Sbjct 252494 ATACATTCAGTGGCG 252508 >seq1834 Length=71578 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| Sbjct 23037 TAGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGA 23096 Query 142562 GCCCCACATCGGGC 142575 |||| |||||||| Sbjct 23097 CCCCCGCATCGGGC 23110 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 13900 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 13959 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 13960 CCCGCATCGGGC 13971 >seq2759 Length=452013 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 123818 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 123759 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 123758 CCCGCATCGGGC 123747 >seq315 Length=118163 Score = 84.2 bits (92), Expect = 4e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 280718 CGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCC 280777 ||||||||| || || || ||||||||| |||| | | | ||| ||||| | |||| Sbjct 53022 CGGTCTTTCCGGTGGTCAAAAGGTCAAAGTTGTTCTTGCCGGAGCCATGTGGAATAACCC 53081 Query 280778 TCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 ||| || ||||||||||||| || ||||||| |||||||||| |||||| || Sbjct 53082 CCACCTGCTCGTTCTCGACGAACCGACCAACTTCTTGGACCGCGATTTTTTGGGCGGCCT 53141 Query 280838 GAGTGCTGC-TCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTCTCACAGCACAGAAT 280896 || ||| | || | ||| | || ||||| || | |||||||||| | |||| Sbjct 53142 TGCTGTTGCGATTAGAGA-ATTCAGGGGTGGCGTTGTGATGATTTCTCACAACGAGGAAT 53200 Query 280897 TTGTC 280901 | ||| Sbjct 53201 TCGTC 53205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027796304836075