Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2508 197 3e-45 seq2726 196 9e-45 seq2257 122 2e-22 seq1704 116 7e-21 seq2845 107 4e-18 seq3047 105 1e-17 >seq2508 Length=12345 Score = 197 bits (218), Expect = 3e-45 Identities = 381/554 (69%), Gaps = 10/554 (2%) Strand=Plus/Minus Query 268204 CTGGACCCCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACAT 268263 ||||| || || || ||||| || || |||| || ||| ||||| ||||| Sbjct 1764 CTGGATACCCGTCGCGATCACGAAATCTTCTGCAACATCCTGCTGCAGCATCATCCAC-- 1707 Query 268264 TGCTT-CG-ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGG 268321 ||| | || ||||| ||| ||| || ||||| |||||| || | ||||| || | | Sbjct 1706 TGCATGCGCACATAATCCTTCGCGTGCCCCCAGTCGCGCAATGAAGCTATGTTACCCATG 1647 Query 268322 AACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTC 268381 ||| |||| || | || || | | || | ||||||||||||||| || || Sbjct 1646 TACAAGCATGGCTCCAGCCCCTGCGCGATGTTTGACAAACCGCGAGTGATTTTGCGCGTT 1587 Query 268382 ACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAAC 268441 ||||| |||||||| | | ||||| ||||| || || |||||||| ||||| ||| | Sbjct 1586 ACGAATGTCTCGCCTCTACGTGGGCTTTCGTGATTAAACAGGATGCCATTGCAAGCGTAT 1527 Query 268442 ATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCG 268501 |||||||| || || ||||||||||| | |||| ||||| | | |||||| || || Sbjct 1526 ATGCCATAGGCTTCTCGGTAGTTCACCGTCATCCAATATGCGTATAGCTTTGCTACCGCA 1467 Query 268502 TACGGAGAACGTGGATGGAAGGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCC 268560 || || || || |||| || || || || || || || |||| | || || Sbjct 1466 TATGGTGATCGGGGATAAAATGGTGT-GTTCTCGCGCTGCGGTGTTTCCTGCACCGATCC 1408 Query 268561 AAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCG 268620 | || || || ||||| || |||||||| ||||| | || || | || | | || Sbjct 1407 GTAAAGTTCCGACGTCGACGCCTGGTAGAATTTTGTCTTCTTCTCCAATCCCAAAAAGCG 1348 Query 268621 GATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCAT 268680 ||||| || |||||||| | || || | ||||| || ||||| ||||| |||||| Sbjct 1347 AATTGCTTCCAGCAAACGCAACGTACCAAGCCCATCAACATCCGCGGTATATTCCGGCGC 1288 Query 268681 CTCGAA--TGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTG 268738 || || | ||| | || || || || || || |||||||||||||| ||||| | Sbjct 1287 TTCAAAACTAACAGC--CACGTGACTTTGAGCACCGAGGTTATAAACCTCGTCCGGCTGT 1230 Query 268739 ACCTGCTGCACGAT 268752 |||| ||||| ||| Sbjct 1229 ACCTCCTGCATGAT 1216 >seq2726 Length=527079 Score = 196 bits (216), Expect = 9e-45 Identities = 183/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 ||||| || || || | | ||| |||||||| || ||| ||||| || ||||||||| Sbjct 136276 TAATTACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAA 136335 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||||| || |||| |||||||| | |||||| ||||| || || |||| ||| ||||| Sbjct 136336 TCGGAAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCT 136395 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 |||||||| ||||| || ||||||||||||| ||| || ||||| ||||| | ||| Sbjct 136396 GGTGGAATACCTTCTTTATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGAC 136455 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||| ||||| |||||||| ||||| || || ||||| |||||||| Sbjct 136456 TCAACTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 158 bits (174), Expect = 2e-33 Identities = 169/221 (76%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 || ||||| || || || | |||| || || || || || ||||| ||||||||||| || Sbjct 136738 CCACCGCGGAGACG-AAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGA 136796 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | || || || | |||||| |||||||| || | | ||| ||||| || || Sbjct 136797 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGG 136856 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||||||||||||| |||||||| | ||| ||| ||||| || || | ||| || || Sbjct 136857 AATGCCTTCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCAC 136916 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | ||||||||| ||||| || || |||||||||| || Sbjct 136917 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGACTA 136957 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| || || ||||| || || || Sbjct 137039 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAA 137098 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || || || || | | ||| ||||| || || Sbjct 137099 AGGGTTCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGG 137158 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | |||||| || || ||||| || || || Sbjct 137159 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACC 137218 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| |||||||| |||||||||||||| |||||||| Sbjct 137219 TCGAGGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || | ||| | || | ||| || || ||||||||||| || || ||||| ||| Sbjct 136510 CCACCACGCAAGCGAAGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAG 136569 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | ||||| ||||| || || | | |||||| || || ||| Sbjct 136570 AGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGA 136629 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| |||||||| || | || || ||||| ||||| | ||||| ||| Sbjct 136630 ATTCCTTCCTTATCTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACT 136689 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || ||||| || || ||||| || ||||| || ||||| Sbjct 136690 TCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 >seq2257 Length=132105 Score = 122 bits (134), Expect = 2e-22 Identities = 143/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 |||||||| ||||||||| | || | || ||||| | |||||| |||||||| || Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || ||| || || || || ||||| ||||||||||||||||| ||| || ||| Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCG 93678 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| ||| || || || || | |||||| || || || ||||| ||||||||||| Sbjct 93677 ATTGTGTC-GCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGAA 93619 Query 68453 --TATCTGCA 68460 ||| |||| Sbjct 93618 GCTATTTGCA 93609 >seq1704 Length=8202 Score = 116 bits (128), Expect = 7e-21 Identities = 190/266 (71%), Gaps = 12/266 (5%) Strand=Plus/Minus Query 186017 ACGATGGCGCCAATCATGGTCTGTGGAATGCCCTCGAAG--TTTGCGAGCAGCTGCTTCG 186074 ||||| |||| |||| | |||| || | || |||| || ||||| |||||||| | Sbjct 4865 ACGATCGCGCGGATCAGGTTCTGCGGCA--CCTCCGAATAATTGGCGAGGAGCTGCTTGG 4808 Query 186075 TGTCCTTGGGGAAGCAGTAGCCGCCGTAGCCGAAGCTCGG---GTTGCAATAGCCTCCGC 186131 | |||||||| | ||| |||||||||||||||||||| || |||| ||| || | || Sbjct 4807 TATCCTTGGGCAGGCAATAGCCGCCGTAGCCGAAGCTGGGATTGTTGTAAT-GCTT--GC 4751 Query 186132 CAATACGTGGCTCGTGCGTGATGCCCTCGATGATGTCCTTTGCATTCAGACCATTCACCA 186191 | || || || ||| | || ||| |||||||| | | | || ||| | | Sbjct 4750 CGATGCGCGGATCGAGGCCGACGCCATCGATGATCTGGCGCGTGTCCATGCCACCGGCGA 4691 Query 186192 TTGCAAACGAGTCGAGCTCATTGAAAAACGACACGCGCATCGCGAGGTACGTATTCGCAA 186251 | || | |||||| || ||||| || | |||||||||||||| || ||||| || | Sbjct 4690 TGGCGTAGCTGTCGAGTTCGTTGAAGAAAGCAACGCGCATCGCGAGATAGGTATTGGCGA 4631 Query 186252 ACAACTTGA-CGCTCTCTGCCTCGCG 186276 ||| ||||| ||| ||| |||||||| Sbjct 4630 ACAGCTTGATCGC-CTCCGCCTCGCG 4606 >seq2845 Length=6650 Score = 107 bits (118), Expect = 4e-18 Identities = 258/385 (67%), Gaps = 4/385 (1%) Strand=Plus/Minus Query 186062 AGCAGCTGCTTCGTGTCCTTGGGGAAGCAGTAGCCGCCGTAGCCGAAGCTCGGGTTGCAA 186121 ||||| || ||||||||||||| | ||||||||| ||| | ||||| || ||| Sbjct 4100 AGCAGTTGGCTCGTGTCCTTGGGCAGGCAGTAGCCACCGAAACCGAACGAGGGATTGTTG 4041 Query 186122 TAGCCTCCGCCAATACGTGGCTCGTGCGTGATGCCCTCGATGATGTCCTTTGCATTCAGA 186181 ||| |||| || || || || | | ||| |||| ||| | | || | || Sbjct 4040 TAGTACGCGCCGATCCGCGGGTCCAGGCACACGCCGTCGACGATCTGCCGCGCGTCGAGG 3981 Query 186182 CCATTCACCATTGCAAACGAGTCGAGCTCATTGAAAAACGACACGCGCATCGCGAGGTAC 186241 ||| ||| ||||||||||| || |||||||| || | || |||||||| ||||| Sbjct 3980 CCACGGGCCAGGGCAAACGAGTCCAGTTCATTGAAGAAGGCAACCCGCATCGCCAGGTAG 3921 Query 186242 GTATTCGCAAACAACTTGACGCTCTCTGCCTCGCGTGTTGACATGAACAGCTTTGGCACA 186301 || ||||| |||| ||||| | ||| || |||| | ||| ||| | || Sbjct 3920 GTGTTCGCGAACAGCTTGATGGCCTCGGCTTCGCTCGAACTGGTGAGCAGGACCTGGACG 3861 Query 186302 TCCTTGATGAGAGACTCGC-GGCCGAGCATCTCTACGAATG-CAGTGGCGTTTTCGCCTT 186359 ||| |||| | ||| | ||| | || ||| |||| | | | | | | || Sbjct 3860 TCCGGCGTGAGTG-CTCCCTGGCGCATCAGCTCGCCGAAGGCCCGCGCCCGCTCCGAACG 3802 Query 186360 CGTCGCCAATGATGATGCGAGAGGGGTGGAGGTTGTCGTAGAGTGCACGACCCTCGCGCA 186419 | || || | || ||| | ||||| ||||||||||||| ||| || |||||||||| Sbjct 3801 C-TCTCCCACGACGATCCTCGAGGGATGGAGGTTGTCGTGGAGGGCCTTGCCCTCGCGCA 3743 Query 186420 GGAACTCCGGGGAGAATGCGATGTT 186444 |||| ||||||||||| ||| ||| Sbjct 3742 GGAATTCCGGGGAGAACACGACGTT 3718 >seq3047 Length=16115 Score = 105 bits (116), Expect = 1e-17 Identities = 199/287 (69%), Gaps = 12/287 (4%) Strand=Plus/Plus Query 268247 TGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCG 268306 || ||||| |||||| |||| || || || ||| ||||| |||||||| ||| Sbjct 6075 TGCAGCATGCGCCACATCCCTTCAACGTATTCTTTCGCGAAACCCCAGTCGCGCTTGGCG 6134 Query 268307 TCCATGTTCCCGAGGAACAGGCATTTCT-GCTTGCCGA----GCTTCACGCGTGCAAGAC 268361 |||| ||| || || ||| || || ||||||| | | || ||| | | | Sbjct 6135 TCCAAGTTACCCAGCTCCAG-CACCTCGAGCTTGCCCAAGCGGATTTTGGCGAACGCGTC 6193 Query 268362 CGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGA 268421 || ||||||||||||| || || | |||||| | ||||||||||||||||| | Sbjct 6194 CG----TGATTTTTCGGGTGACAAATTCCCGGCCACGCAATGGGCTCTCGTGGTTGAACA 6249 Query 268422 GGATGCCGTTGCAC-GCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTAT 268480 |||||||| | ||| |||| |||||||| |||||||||||||| | |||||| Sbjct 6250 GGATGCCGCT-CACTCCGAAGATGCCATAGCTTTCACGGTAGTTCACAGTCATCCAGTGG 6308 Query 268481 GCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGT 268527 ||| | | ||| || || |||| ||| || || | ||| ||||| Sbjct 6309 GCATAGAGCTTGGCCACGCCGTAGGGACTGCGCGGGTAGAAAGGCGT 6355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921586975139000