Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq1228 109 2e-19 >seq1228 Length=2400 Score = 109 bits (120), Expect = 2e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 42862 GTCGCGGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGG 42921 |||||| | ||||||||| || ||||||||||||||||| | ||||||||| ||||||| Sbjct 734 GTCGCGCAGGATGCCGCCGACGCCCGTCGCCGCGCCCTGATATGGCTCGATGTACGAGGG 675 Query 42922 GTGGTTGTGACTCTCCGCCTTGAACGTGACCGCCCATCCCTCGCCGACGTCGATGACGCC 42981 ||||||||| ||| |||||| || | ||| || ||||||| ||||| ||||| Sbjct 674 GTGGTTGTGCGATTCCATCTTGAAGATGGCGGCCTGGCCATCGCCGATATCGATAACGCC 615 Query 42982 CGCGTTCT 42989 || |||| Sbjct 614 GGCATTCT 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148240986690050