Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq315 98.7 2e-15 seq1704 89.7 1e-12 >seq315 Length=118163 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 333775 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 333834 ||||||||||| ||| ||||| || |||| ||||| || || ||||| |||| Sbjct 52093 GTTCGTAATGGTATATATCCGTGCATACTTCGTCCAGGAAGCCAGAATCGTGACTGACAA 52034 Query 333835 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACA 333894 ||| || | | || || | | | |||||||| |||||| ||||||| | | Sbjct 52033 TCAAGCTAGTTATTTCTGTATGCTGTTTGAGGTATTCTTCGAGCCACTTCACGTTGGCGA 51974 Query 333895 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCAC 333954 || | ||||| ||||| ||||||||||| || | | || |||| | |||||||| Sbjct 51973 CATCCAAGTGGTTAGTCGGTTCGTCAAGAAGGAGAACATCGGCCTTCATAATCATTGCAC 51914 Query 333955 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGA 333988 ||||||| || | ||||| |||||||| || || Sbjct 51913 GTGCAAGCGCTAACTTCATCTTCCACCCGCCAGA 51880 >seq1704 Length=8202 Score = 89.7 bits (98), Expect = 1e-12 Identities = 190/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 306442 TCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACCCCCTCG 306501 |||||||| || ||| | || || || || | ||| | | || |||||| || Sbjct 4889 TCCTTGCGGGTGCGATTGGCATCGACGATCGCGCGGATCAGGTTCTGCGGCACCTCCGAA 4830 Query 306502 AAATTAGCCAGCAATTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCGTAACCGAACGAT 306561 |||| || || | ||||| |||||||| || | |||||| | ||||| ||||| Sbjct 4829 TAATTGGCGAGGAGCTGCTTGGTATCCTTGGGCAGGCAATAGCCGCCGTAGCCGAAGCTG 4770 Query 306562 GGATTCGAATATCCCTGGCCAATTCGAGGTTCTAGAGTAACACCATCGATGATTTCTTTC 306621 ||||| || || ||| || || || || || || ||||||||||| | | Sbjct 4769 GGATTGTTGTAATGCTTGCCGATGCGCGGATCGAGGCCGACGCCATCGATGATCTGGCGC 4710 Query 306622 GCATTCATATCATGAGACATTGCGAATGTATCTAGTTCGTTGAAGTATGCAACTCGCATT 306681 | | ||| || | || ||| | | || |||||||||||| | ||||| ||||| Sbjct 4709 GTGTCCATGCCACCGGCGATGGCGTAGCTGTCGAGTTCGTTGAAGAAAGCAACGCGCATC 4650 Query 306682 GCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCGCG 306725 || ||||| || || | ||| || |||| ||||| || ||||| Sbjct 4649 GCGAGATAGGTATTGGCGAACAGCTTGATCGCCTCCGCCTCGCG 4606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102836548251250