Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2550 105 7e-18 seq2726 96.9 3e-15 seq2473 82.4 8e-11 >seq2550 Length=338734 Score = 105 bits (116), Expect = 7e-18 Identities = 345/531 (65%), Gaps = 9/531 (2%) Strand=Plus/Plus Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGC 154077 |||| |||| ||||| ||||||| ||||| || | ||| ||| || || || | Sbjct 314732 AGATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCAC 314791 Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137 | ||||| |||| || | ||||||| ||||| || | ||| ||| | || | | Sbjct 314792 CTTGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAG 314851 Query 154138 CGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGC 154197 | ||| || || || | | ||| ||| || | |||| ||||||| | Sbjct 314852 AAGAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGAC 314911 Query 154198 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCC--AGCGTCCTGTAGATGC 154254 |||| || || || || ||| || || ||||||| | | || || ||| |||| Sbjct 314912 CAATACCACCAGCTGT-CTTGGAAAT--CAGCGCACAAGTCTTGAGAGTATCGTAAATGC 314968 Query 154255 CGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCG 154314 ||||||||||||| || | ||| | ||||| ||| |||||| || | ||| Sbjct 314969 CGTCGATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCG 315028 Query 154315 TTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374 ||||||| || |||||||| || || || || | ||| ||| ||||| | Sbjct 315029 TTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTAT 315088 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || || ||||| | || ||||| || || ||||| || | || || ||||| | || Sbjct 315089 AGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCA 315148 Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494 |||| ||||| || || || ||| | || ||| | | |||| | || || | Sbjct 315149 TGTGTTGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTG 315208 Query 154495 TTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCG 154545 | ||| | || ||||||| ||| | |||||| | |||| | ||||||| Sbjct 315209 TCTTGAATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCG 315259 >seq2726 Length=527079 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTT-TGAATGTTGTAGTCGCT 138446 || || ||||| | ||| || || || | | || | |||| |||||||| || ||| Sbjct 136282 CCACCACGCAATCTCAACACCAAGTGCA-GAGTGCTTTCTTTCTGAATGTTATAATCGGA 136340 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || |||| | |||| || || || ||||| || || Sbjct 136341 AAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 136400 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||||||||| || ||| | ||||| |||| |||| | | ||||| | ||||| Sbjct 136401 AATACCTTCTTTATCT-TGAATCTTTGTCTTAACATTGT-CGATTGTGTCCGATGACTCA 136458 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | ||| | |||||| ||||| || ||||| || ||||||||||| Sbjct 136459 ACTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | || | ||| || || | | | |||||||| |||||||||||||| Sbjct 137039 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAA 137098 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||| | | |||| | || || ||||| ||||| Sbjct 137099 AGGGTTCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGG 137158 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||| | ||||||||| Sbjct 137159 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACC 137218 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 |||| || | || || || ||||| || || || || |||||||||| Sbjct 137219 TCGAGGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCATGG 137267 >seq2473 Length=337605 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || | || || ||||| || || || | || || || | ||||| || Sbjct 140378 GAGGCAGTTGAAATTGAGAAGGAATTCTTGACCGATGCCCTCCCTTGTGCTCTGCTTGGA 140437 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||| | || |||||| | ||||||||||| || || || || || | ||| | Sbjct 140438 ATGAACTCCAAGCTCATGTGTCAATACATCGAGTTCGTTGCCGACCGGTTGCTTGTG--G 140495 Query 52734 CTC-GGGCAGC-CAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTT 52791 ||| |||| | ||||| || || || || || || || |||||| |||| || | Sbjct 140496 CTCTTGGCAACAAAAAGTTCTATAATGCCACTAACCCATTCGACTTTATGGACAATATCT 140555 Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| | || ||||||||||| || |||||||| || || || || Sbjct 140556 CGCTGGCTGGTAAGACCAACTTCTTTGAGAAGCGTGTTGGTGATTA 140601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496243324914000