Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2726 118 8e-22 >seq2726 Length=527079 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| ||||| | | || | || || || || |||||||| || |||||||| | Sbjct 136510 CCACCACGCAAGCGAAGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAG 136569 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | ||| || || || | |||||||| ||||| || ||| Sbjct 136570 AGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGA 136629 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||||| |||||||| | || || || ||| ||| || Sbjct 136630 ATTCCTTCCTTATCTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACT 136689 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 136690 TCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAAATTTGCATA 136737 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| ||||| || ||||| ||||| ||||| |||| | | |||| || Sbjct 136755 AACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTC 136814 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || ||||| ||| | |||||||| || ||||| ||||| ||||||||||| Sbjct 136815 GAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 136874 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| ||| | || || | || |||||||| || || || | ||| ||||| || Sbjct 136875 AATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTT 136934 Query 15147 ACCTGTCAGAGTTTTTAC 15164 || || ||||| || || Sbjct 136935 TCCGGTAAGAGTCTTGAC 136952 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||||||||| || || || |||||||| || || ||| | ||||| Sbjct 137056 AACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCTTC 137115 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||||| ||||| | ||||| || || ||||| || || || |||||||| Sbjct 137116 AAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTG 137175 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || ||| | || ||| | || ||||| || ||| || || || | ||| ||||| || Sbjct 137176 GATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTCTT 137235 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || ||||| Sbjct 137236 TCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357378606176375