Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq2754 122 2e-23 >seq2754 Length=5034 Score = 122 bits (134), Expect = 2e-23 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 8736 CTGGACAAGCTGACCGAGGCTGGCGAGTTCAAGAACAAGAAGATCCCGGACGGCGAGAAG 8795 || ||||| | | |||||| |||||||||||||||||| |||||| ||| | |||| Sbjct 3771 CTCGACAACGTCAACGAGGCCGGCGAGTTCAAGAACAAGCCGATCCCCGACTTGGCGAAG 3830 Query 8796 GCAACCATCACCGCTGGCACCAAGGGCAACACCATCAACCTGACGCGTCAGGCGATCATC 8855 | | ||| ||| || |||||||||| |||||||||| | || ||||||||| || Sbjct 3831 GAGAAGATCCGCGCGACGACGAAGGGCAACATCATCAACCTGTCTCGGCAGGCGATCGTC 3890 Query 8856 AACGACGACCTGGGTGCGTTCCTCGGCTTGGCGACCGCCTTCGGTCGTGCCGCAAAGCGG 8915 || |||||| ||| | |||| |||| | || || | |||| || || || |||| | Sbjct 3891 AATGACGACATGGAGGTGTTCTCCGGCCTTGCCGTCGACCTCGGCCGCGCGGCCAAGCTG 3950 Query 8916 ACCATTGAGGCCGACGCGTATGCGTTCCTCGCCAGCAATCCG 8957 || || ||| ||||| | || || || |||||| ||| Sbjct 3951 ACGATCGAGATCGACGTTTTCGCCCTCATCAACAGCAACCCG 3992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128792096904350