Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2726 114 1e-20 seq2257 89.7 5e-13 >seq2726 Length=527079 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | |||||||| || ||||| ||||| || | || ||| ||| || Sbjct 137057 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCTTCA 137116 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 |||||||| ||||| ||||||| || ||||| || ||||| |||||||||||||| | Sbjct 137117 AGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGG 137176 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | || | ||||| || ||| || |||| ||| | || || Sbjct 137177 ATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTCTTT 137236 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || ||||| || || || || |||||||||| Sbjct 137237 CCCGTCAGGGTCTTGACGAAGATCTGCATGG 137267 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| ||||||||| || | || ||||| ||||| || |||||| Sbjct 136282 CCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAA 136341 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| ||||| || |||| | ||| ||||| || || || Sbjct 136342 AGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGA 136401 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || || ||| | | || ||| | | |||| ||||||| ||| || Sbjct 136402 ATACCTTCTTTATCT-TGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAAC 136460 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | |||||| || || || ||||| || ||||||||||| Sbjct 136461 TTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||||||||||||||||||| | || || ||| || || || ||||| Sbjct 136540 GTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCG 136599 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| || || ||||| || || || || ||||| || ||||| || Sbjct 136600 GCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTGGTTTTT 136659 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | || ||||| | || | |||||||||||||| ||| Sbjct 136660 ACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGTT 136719 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||| ||||| Sbjct 136720 TTCACGAAAATTTGCAT 136736 >seq2257 Length=132105 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 ||||| ||||| ||||||| || || || || || ||||| ||||| ||| ||||| Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||| |||||||| || || |||||||||||||| || || ||| | | ||| Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCG 93678 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | ||||| | ||| || || | ||| | || |||||||| || || || || || Sbjct 93677 ATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGAA 93619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475482522938000