Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2726 123 2e-23 seq2257 82.4 7e-11 >seq2726 Length=527079 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || ||||| || || || ||||| ||||| ||||| || || ||| || Sbjct 136528 ACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCA 136587 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| ||||| || | ||||| ||||| || || |||||||| ||||| ||||||||| Sbjct 136588 AGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGA 136647 Query 45252 ATTTT--TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||||| || || || | || | |||||||| || || ||||| | |||| |||| Sbjct 136648 ATTTTGGTTTTTACATTG--TCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTT 136705 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| || ||||| || ||||||||||| Sbjct 136706 TGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | ||||| || ||| || || || ||||||||| | || | Sbjct 136294 CTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCCA 136353 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | || ||||| || | || | |||||||||||| || ||||| ||||||||| Sbjct 136354 TCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTTA 136413 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||| | ||||| | | | | || | ||||| || ||||| ||||| || || | Sbjct 136414 TCTTGAA-TCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAACTTCCAGCGTGAT 136472 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || || ||||| || ||||| ||||| Sbjct 136473 CGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || ||||| || || ||||||||||| || |||||||| Sbjct 136735 ATACCACCGCGGAGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCA 136794 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || || || | || || || ||| | ||||| ||||||||||| || Sbjct 136795 GAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGA 136854 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || |||| | || || | || | || | || || || ||||| Sbjct 136855 GGAATGCCTTCCTTGTCCTGAA-TCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTC 136913 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || || || || | || || ||||| ||||| || || Sbjct 136914 CACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGAC 136952 >seq2257 Length=132105 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||||||||||||||||||||| | || || || | || ||||| ||| | | Sbjct 93799 CCTTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGA 93740 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270 ||||||||||||| || || || ||||| || || |||||||| || || | | Sbjct 93739 TCAATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGT 93680 Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330 | | |||||| ||||| || || || || | || |||||||| || || || || | Sbjct 93679 CGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGA 93620 Query 45331 A--AATTTGCATCG 45342 | ||||||| || Sbjct 93619 AGCTATTTGCAGCG 93606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985826127000