Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2550 159 4e-34 >seq2550 Length=338734 Score = 159 bits (176), Expect = 4e-34 Identities = 414/626 (66%), Gaps = 9/626 (1%) Strand=Plus/Plus Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTT 116717 |||||| ||||| ||||||||||| ||| ||| || | || | | |||||| |||| Sbjct 314536 TACTTTTCATAGAGAGCCTCAAACTCGTCA-CCATAGACATCAGCCAACCCTGGCGCCTC 314594 Query 116718 ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 116777 || |||||||| | | ||| | ||| || |||||| || |||||||| | ||||| Sbjct 314595 ATTCGGACAGAACAAGGTCCAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGG 314654 Query 116778 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 116837 | |||| || || ||||||||| || | ||||||| | || || || || Sbjct 314655 GGTCCAAAGAGCAAGGAAGAGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCG 314714 Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 116897 | |||| ||| || | |||||| | ||||| ||||| ||||| | |||| | | | Sbjct 314715 AAGATCCAGAAATTCAAAGATATCGGAATGCCAAGGTTCAAGGTAGATTGCGA-AGGCGC 314773 Query 116898 CTTGC-----GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952 || || | | ||| | || | || || | || || |||||| || || ||| Sbjct 314774 CTGGCCGTTTGTTG-CCACCTTGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGC 314832 Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTG 117012 || || || || |||| ||| ||||||||| || |||| || |||||| | Sbjct 314833 ATAGGTATAATTCCATTAGAAGAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGG 314892 Query 117013 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTG 117072 | | |||| || | ||||||||| || || ||| || || | || || | || Sbjct 314893 ATACGATGGACGTTAAGACCAATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTG 314952 Query 117073 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 117132 ||| | |||| || || ||||| || |||| | |||| || || || | | Sbjct 314953 AGAGTATCGTAAATGCCGTCGATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCC 315012 Query 117133 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 117192 ||||||||| || || || |||||||| ||||| |||| || || |||| | Sbjct 315013 ATTTGTGGCTGGGGCGTTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTC 315072 Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252 ||||||||| || |||||||| | | | ||| || || || ||||| || | | Sbjct 315073 TGGGACATCAAATTATAGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACT 315132 Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278 | || ||||||| ||||| ||| || Sbjct 315133 GCAACACGCATAATCATGTGTTGCGG 315158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613483618317000