Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2473 125 1e-23 seq2550 89.7 8e-13 >seq2473 Length=337605 Score = 125 bits (138), Expect = 1e-23 Identities = 327/488 (67%), Gaps = 13/488 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGA--TATTGATTCCATGAACCCGAATGGG 159706 |||||| || ||||||||||| || ||| || ||||| ||||| || |||||||| Sbjct 140587 CTTCTCAAAGAAGTTGGTCTTACCAGCCAGCGAGATATTG--TCCATAAAGTCGAATGGG 140530 Query 159707 TTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAAT 159766 || | | | |||| ||| || |||||| | ||||||| ||| || || || Sbjct 140529 TTAGTGGCATTATAGAACTTTTTGTTGCCAAGAGCCACAAGCAACCGGTCGGCAACGAAC 140470 Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826 |||||||| |||||| ||| |||| || || ||||| | ||||| || || Sbjct 140469 TCGATGTATTGACACATGAGCTTGGAGTTCATTCCAAGCAGAGCACAAGGGAGGGCATCG 140410 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTC-GTA 159885 | || || ||||||||||| || || || || || | ||| || | ||| | | Sbjct 140409 GTCAAGAATTCCTTCTCAATTTCAACTGCCTCTGTGATAAT-GGCTTCA-ACGGCCTGGG 140352 Query 159886 CCCCGGCTTGCCCAAAATG-TGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 | || ||| | ||| || |||||| ||||| |||||||| ||| || | Sbjct 140351 GACTGG---GCCGATGATGCATGTGAGAAAACAGCAGGCAGGCAAAGTCAGTGTGAAGAC 140295 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 |||| || |||||||| || ||||| || | | | || || ||||| | || ||| | Sbjct 140294 CCTCATCACGAGAGATCAATTCGTTCGAAAAGGTAAGACCAGGCATAAGACCGCGCTTCT 140235 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 | ||||| ||||||| || || | ||||| || || || ||||| || || ||||| | Sbjct 140234 TTAGCCAGAAAATGGAAGCGAAGGAGCCGCTGAAGAAAATTCCCTCGACAGCAGCAAAGG 140175 Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTG-TCATGGGTCCACCTTTTGGCCCATTCA 160123 | | | | || | || | | || || || ||| |||| | ||||||| ||| Sbjct 140174 CAATCAAGCGCTGGGCGAATGTCG-ATTCCTGATCCTGGATCCATCGAATGGCCCAGTCA 140116 Query 160124 GCCTTCTT 160131 |||||||| Sbjct 140115 GCCTTCTT 140108 >seq2550 Length=338734 Score = 89.7 bits (98), Expect = 8e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAG 203943 |||||||||||||| ||||| | || || ||| |||| | | ||||||| || | Sbjct 313384 AGATAGTACATGCCTGTCTTCAAACCAAGCTTCCATCCCGCA-AAGTGCATGCTAGTGAT 313442 Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003 ||||| || | | || || | ||||||||| ||||| ||| ||||| ||||| | Sbjct 313443 TTTGCCCATGGTAGGTTCCTTGAGGTGAATGTTGAGAGATTGGGACTGGTCAATGAATGC 313502 Query 204004 CGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||||| || |||| | |||||||| | || || |||||||| || |||||| Sbjct 313503 ACCCCGATCGGCAGCCAGTTGAATAATGGTTCTTTGTGAGATCTCCCATACTGTCTTG 313560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795124636222000