Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2726 123 6e-23 seq1061 87.8 4e-12 >seq2726 Length=527079 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || || || | ||| || || | | |||| || Sbjct 136293 TCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCC 136352 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| |||||||||||||| ||||| || || |||||||| || ||| |||||| Sbjct 136353 ATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTT 136412 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || |||| ||||| | || || || |||| |||||| Sbjct 136413 ATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAACTTCCAGCGTGAT 136472 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || ||||| |||||||| ||||| || Sbjct 136473 CGTTTTTCCAGTGAGTGTTTTCACGAAAATCTG 136505 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || ||||| || |||||||| | ||| || |||| | ||| | || || Sbjct 136753 AGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCC 136812 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || | ||| |||||||| ||| ||| ||||| ||| Sbjct 136813 TCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 136872 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| || || | || || || || | ||||| ||| Sbjct 136873 TGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTC 136932 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || ||||| || || Sbjct 136933 TTTCCGGTAAGAGTCTTGAC 136952 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||||||||| ||||| | ||||| |||| | || | ||||| Sbjct 136525 AGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCC 136584 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||||||||| || || | ||| || || || || ||||||||| || Sbjct 136585 TCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCT 136644 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || || || |||| ||||| | | ||| || ||||| || || || Sbjct 136645 TGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTT 136704 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || |||||||| |||||||| Sbjct 136705 TTGCCGGTCAGGGTTTTCACGAAAATTTG 136733 >seq1061 Length=321426 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| || | |||||| |||| | ||| | || || Sbjct 107729 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCC 107788 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| |||||||||||||| || Sbjct 107789 TCGAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGG 107829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178875152331025