Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2473 140 3e-28 seq2726 84.2 2e-11 >seq2473 Length=337605 Score = 140 bits (154), Expect = 3e-28 Identities = 199/277 (72%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| ||||| |||||| || || | || || || | |||||||| ||| || || Sbjct 139981 GTACGTGTCAATGAGGAGAGAGTATGTCTCGGAATGGATATTCTCCATCATGATCTGGAA 139922 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 ||||||||||| || ||||| | ||| ||||| | || ||| | |||||| |||| Sbjct 139921 TCCGTAAAAGCAACGAGCCTCTGGAATCTGAACTTCA-GCGCTGAATCTCTCGACAAGAT 139863 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | || ||||||||||| ||| ||||||||| |||||||| ||| | |||||| | || Sbjct 139862 TCTCATTGACGATGCCATCGGAGGCGGCGAAGAAGGCCAGGACGCGAGAGATGAAGTAGC 139803 Query 133346 GCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 | || | |||||||| | | | |||||| | || ||||||| || | || | Sbjct 139802 GTTCATCGTCGTTCAGTCGATGGTTCCAGTCATGGAGATCTTTGGACAAATCGATTTCTT 139743 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || || || ||||||||||||||||| Sbjct 139742 CAGCAGTCCAGAAGGATGCTTCGGCTTTTTTGTACAT 139706 Score = 109 bits (120), Expect = 5e-19 Identities = 321/482 (67%), Gaps = 12/482 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTC-ATAAAATCCAAGGGGTT 132683 |||||||| || || || || || ||| || || | ||| ||||| || || ||||| Sbjct 140586 TTCTCAAAGAAGTTGGTCTTACCAGCCAGCGAGAT-ATTGTCCATAAAGTCGAATGGGTT 140528 Query 132684 GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | | || ||| ||| || | || | || |||| || |||||| |||||||| Sbjct 140527 AGTGGCATTATAGAACTTTTTGTTGCCAAGAGCCACAAGCAACCGGTCGGCAACGAACTC 140468 Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGG 132802 ||||||||| ||||| | | | || | ||| |||||| |||| || || || |||| Sbjct 140467 GATGTATTGACACATGAGCTTGGAGTTCATTCCAAGCAGA-GCACAAGGGAGGGCATCGG 140409 Query 132803 T-GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 | |||| | || ||| || | || || || |||| || | |||| | | Sbjct 140408 TCAAGAATTCCTT-CTCAATTTCAACTGCCTCTGTGATAATGGCTTCAACGGCCTGGGGA 140350 Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 || ||||| || || || |||| || ||| |||||||| || | ||||| Sbjct 140349 CTGGGCCGATGATGCATGTGAGAAAACAGCAGGCAGGCAAAGTCAGTGTGAAGACCCTCA 140290 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG-CCGGGCATGAGGCCGCGTTTTTTGAG 132980 || | || || | |||||| | |||| ||| || ||||| || ||||| || || || Sbjct 140289 TCACGAGAGATCAATTCGTT-CGAAAAGGTAAGACCAGGCATAAGACCGCGCTTCTTTAG 140231 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||||| ||| ||||| | |||||||| || || || || | Sbjct 140230 CCAGAAAATGGAAGCGAAGGAGCCGCTGAAGAAAATTCCCTCGACAGCAGCAAAGGCAAT 140171 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTT--TGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || ||||| | |||| || | ||| | | ||| |||||| || | ||||| || ||| Sbjct 140170 CAAGCGCTGGGCGAATGTCGATTCCTGATCCTG--GATCCATCGAATGGCCCAGTCAGCC 140113 Query 133099 TT 133100 || Sbjct 140112 TT 140111 >seq2726 Length=527079 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || ||||||||| |||| || ||| | | Sbjct 137265 ATGCAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCTAGT 137206 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | || | | |||| || |||| ||||| ||||| || || | |||| Sbjct 137205 GACACTATTGATAATG--TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACC 137148 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | || || |||||||| || || | || ||||| ||||||| Sbjct 137147 AGCAACGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTACA 137088 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| || ||||| | || || || ||||| || || Sbjct 137087 ACATTCAGAAGGAGTCTACCCTTCACTTGGTTCTTCG 137051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500153574608000