Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2726 143 1e-28 >seq2726 Length=527079 Score = 143 bits (158), Expect = 1e-28 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||| || ||||||||||| | || |||||||| || Sbjct 136736 ATGCAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCC 136677 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| |||||||||||||||||||||||||| || |||||| Sbjct 136676 GACACAATCGACAATGTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATCAA 136617 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| ||||| | || || |||||||| ||||| | || | | ||||| ||| Sbjct 136616 CAACGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAAT 136557 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | || || ||| Sbjct 136556 ATTCAAAAAGAGTCGACTCTGCAC 136533 Score = 116 bits (128), Expect = 1e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| |||||||| ||||| ||||| || || || || ||||| ||||| Sbjct 136508 ATGCAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCG 136449 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | |||| ||| ||||||||||| ||||| ||||| || || || Sbjct 136448 GACACAATCGACAATGTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAG 136389 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || || | || || || ||||||||||| | || | | |||||||| Sbjct 136388 CAACGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAAC 136329 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTG 391268 ||| | || || || || ||||| || || ||| || Sbjct 136328 ATTCAGAAAGAAAGCACTCTGCACTTGGTGTTGAGATTG 136290 Score = 100 bits (110), Expect = 1e-15 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| || || || || || || || || || ||||| || || |||||||||| || | Sbjct 136954 TCGTCAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCG 136895 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | || || ||||| || |||||||| ||||||||||| || |||||||| | Sbjct 136894 ACAACGTGAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGA 136835 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 ||||| | || || || || || || || | ||| | | |||||||| ||| | |||| Sbjct 136834 TTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGG 136775 Query 391240 ATGCAACACTTCA 391252 | | || ||||| Sbjct 136774 AATCTACTCTTCA 136762 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || || || || || || | Sbjct 137265 ATGCAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCTAGT 137206 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || || || ||||| ||||| || || |||||||| || Sbjct 137205 GACACTATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 137146 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || || | || ||||| ||||||||||| |||| | | || || || Sbjct 137145 CAACGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTACAAC 137086 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || |||||||| || Sbjct 137085 ATTCAGAAGGAGTCTACCCTTCACTTGGT 137057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975640559782100