Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq426 215 4e-50 seq480 86.0 5e-11 >seq426 Length=421947 Score = 215 bits (238), Expect = 4e-50 Identities = 895/1392 (64%), Gaps = 25/1392 (2%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | |||||| |||||||| || ||||| || || | | || || Sbjct 180560 ATACCGTTGGCATCAAGATCAAAAGTGACTTCGATCTGAGGAACACCACGAGGGGCGGGA 180501 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | ||| | || || || ||||| || || |||||| Sbjct 180500 GGAATTCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTATCCTTGGTACGAGCACGTTCA 180441 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | |||||| ||| ||| || || || || | || | || | | Sbjct 180440 CCCTCGTACACTTGGATCAAAACACCAGGCTGGTTGTCAGAGAAGGTGGAGAAGGTTTCG 180381 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || || || ||||| | | |||| | ||||| | ||| || || Sbjct 180380 GACTTCTTGGTTGGGATAGTGGTGTTGCGCTTGATAAGAGGAGTCATGACACCTCCAGCA 180321 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 ||||| | ||| | ||||||||| | ||||| | |||| || | || | || || Sbjct 180320 GTTTCGATACCCAAAGAAAGAGGGGCAACATCGAGAAGGAGGATTTCATTAGTAGACTTG 180261 Query 517572 CATCAGTT-TGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 | || | | |||| |||||| |||| || || | ||| || ||||| || ||||| || Sbjct 180260 GAAGAGGTGTCACCAGACAAGA-TAGCCGCCTGGACAGCGGCGCCATAGGCGACAGCCTC 180202 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 517689 ||| || || | | || || ||| || |||||||| |||| |||| | | ||| Sbjct 180201 ATCGGGGTTGATGGATTTGTTGGGTTCCTTGCCATTGAAGAAATCGGAAACCATCT-TCT 180143 Query 517690 T-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 517748 | |||||| ||||| | || || ||||| || || ||||| || || ||||||| Sbjct 180142 GGATCTTAGGGATACGGGTAGAACCACCAACCAAGACGATTTCGTGGACGGAGGATTTAT 180083 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 | | || | ||| | || ||||| || || | | | || | ||| Sbjct 180082 CAATCTTGGCATCACGGAGGACACGCTCAACAGGCTCCATGGTGGAGCGGAAGAGGTCCT 180023 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAAC 517867 ||||| |||||||| ||| | || | || | || || || || || ||||| Sbjct 180022 GGCAAAGCTCTTCGAAACGAGCACGGGTGATAGA-AGTGTAGAAGTCGATACCCTCGAAG 179964 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 | |||||||| |||||| | ||| || | | |||||| || | || || ||||| || Sbjct 179963 AGAGAATCAATTTCAATGGAAGTCTGGGCGGCAGAAGAAAGAGTGCGCTTGGCACGCTCG 179904 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTTTTATATT 517985 || || || | || | || | || | ||||| | | || | || | | Sbjct 179903 CAGGCAGTGCGAAGACGACGGAGAGCACGAG--GATTGGAGGAGAGATCCTTCTTGTGCT 179846 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | | ||||| || | ||| | | ||||| || || |||||||| |||||||||| Sbjct 179845 TGCGTTTGAATTCGTTGACAAAGTGGTTGACAAGGCGGTTGTCAAAATCCTCACCTCCCA 179786 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | | || | || | |||| | | |||| ||| | || ||||||| || ||| || | Sbjct 179785 AGTGGGTGTCACCGGCAGTAGATTTAACTTCGAAGATGCCCTCTTCAATAGTCAAGAGGG 179726 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT 518165 |||||| ||| |||||||||| ||| ||||| | || || || ||| || | Sbjct 179725 ACACATCAAAGGTACCACCACCCAAATCGAAAATCAAAACGTTGCGCTCACCGTCATGCT 179666 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 | || || | || || |||| || |||||||| || || || ||||| | | || | Sbjct 179665 TCTTGTCCAAGCCGTAAGCAATGGCGGCAGCAGTGGGCTCGTTGATAATACGGAGGACGT 179606 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 ||||||| ||||| || ||||| || || ||||| | ||| || ||||| || || | Sbjct 179605 TAAGACCGGCAATAAGACCGGCATCCTTGGTAGCTTGACGTTGAGAGTCGTTGAAGTAGG 179546 Query 518286 CAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTT 518345 |||||||||||| |||||| | | || ||| | |||| || || | | Sbjct 179545 CAGGAACAGTAACAACGGCGTTGTTGACGGTGCCACCGAGGTAAGATTCGGCAGTCTCTC 179486 Query 518346 TCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-ATTT 518404 |||| ||| | || | ||| || || |||| || || | | ||||| | || | Sbjct 179485 TCATCTTAGTCAAGACCATAGAGGAGATTTCCTCAGGAGTGAACTGCTTTGTCTCGCCCT 179426 Query 518405 TGATATGATACTT-CAAAATATGGTTTATTACCAACATT---AATAACTTTAAATGGCCA 518460 ||| || |||| | | | | ||| || | || || | || || || | Sbjct 179425 TGA-ATTCGACTTGGATGACAGGCTTT----CCGGCTTTGTCGATGATCTTGAACGGGAA 179371 Query 518461 GTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTTG 518519 || ||||||||| | || || || | ||| || || | | ||| || | || || | Sbjct 179370 GTGTTTCATATCAGCCTGGAC-CTCGGCGTCGTTGAATTTACGACCGATGAGACGCTTGG 179312 Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 |||| |||| || ||| | || || || ||| |||| | || || ||||| || |||| Sbjct 179311 CATCGAAAACTGTGTTGATGGGGTTCATCGCAACTTGGTTCTTTGCGGCATCACCGATCA 179252 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 | || || ||||| || | || | || || || || || ||||| || || || | Sbjct 179251 ATCGCTCGGTATCTGTGAAAGCCACGAACGAAGGGGTGGTTCGGTTACCCTGGTCGTTGG 179192 Query 518640 CAATAATTTCAA 518651 | |||||||||| Sbjct 179191 CGATAATTTCAA 179180 >seq480 Length=190759 Score = 86.0 bits (94), Expect = 5e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 ||||| || || |||||||||| ||| |||| |||||||| | || ||||| || Sbjct 35891 TTGATTCTTTGCAGCATCTCCAACAAGACGTTCCTCATCTGTAAAGGCCACGTATGAAGG 35950 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 ||| | || ||||| ||||| || | | |||||||||||| ||||||||| || || Sbjct 35951 AGTGATACGGTTACCCTGATCGTTTACCAAAATTTCAACTTTTCCATTTTGCATCACTCC 36010 Query 518674 TACACAACTA 518683 ||||| ||| Sbjct 36011 GACACAGCTA 36020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780669808370950