Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2550 161 1e-34 seq2419 82.4 9e-11 >seq2550 Length=338734 Score = 161 bits (178), Expect = 1e-34 Identities = 406/610 (67%), Gaps = 9/610 (1%) Strand=Plus/Plus Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT-CGCCTTGTCGGGACAGAAGAGG 110589 ||||||| || | || || ||||||| | ||||| ||||| | |||||||| | | Sbjct 314552 CCTCAAACTCGTCACCATAGACATCAGCCA-ACCCTGGCGCCTCATTCGGACAGAACAAG 314610 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 | ||||| || || |||||| | |||||||||| || || |||| | || | Sbjct 314611 GTCCAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGG 314670 Query 110650 AAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCC 110709 || || |||||| | | ||||| | || ||||| ||| || |||| ||| || Sbjct 314671 AAGAGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCA 314730 Query 110710 ATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC----CTTACGACGACC 110765 | |||||| || ||||| ||||| || |||| |||| || || | | | | | Sbjct 314731 AAGATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCA 314790 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 | | || | ||| || || || || || ||||| | ||||||||| |||||||||| Sbjct 314791 C-CTTGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATT 314849 Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885 || |||||||| || ||| ||| | |||| || || |||| | | Sbjct 314850 AGAAGAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAG 314909 Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATAC 110944 |||||||||||| || ||| ||| | |||| | ||| |||| ||| | ||||| | Sbjct 314910 ACCAATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCT-TGAGAGTATCGTAAATGC 314968 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | || || |||| |||| | | || ||||| ||||||| ||| || || | |||| Sbjct 314969 CGTCGATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCG 315028 Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGT 111064 ||||||| ||||| || || |||| |||||| |||| | ||||||||| || | Sbjct 315029 TTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTAT 315088 Query 111065 ATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACA 111124 | || || | || | ||| | || ||||| |||| ||||| ||||| | || Sbjct 315089 AGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCA 315148 Query 111125 TATATTGAGG 111134 | | ||| || Sbjct 315149 TGTGTTGCGG 315158 Score = 86.0 bits (94), Expect = 7e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 ||||||| |||| || |||| ||| || || ||||| || | | || ||| ||| Sbjct 314238 GACATATGTGGGCAGCGCAAGAGATGCTAGGTTGCAAACCGCAACTTCATCTGGCGAGGT 314297 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 ||| || | |||||||| ||||||||||| || ||| || | ||| ||||| || Sbjct 314298 GTACTCGATGATTTCCGTGCACAAGTTGGAGCTACGAATCGTTCCGAGGTTTTTCTGGTT 314357 Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447 |||| ||||||||| ||||| ||||||||| | || | || || || || || Sbjct 314358 GCTTTTGCGGTTGCATGCGTCCTTGTAGAGCATGAAGGGATTTCCGGTCTCGGTTTG 314414 >seq2419 Length=1862 Score = 82.4 bits (90), Expect = 9e-11 Identities = 240/365 (66%), Gaps = 6/365 (2%) Strand=Plus/Plus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 ||||| || || ||||| || || || | || || || || ||||| || ||||| Sbjct 425 TCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCGGCC 484 Query 11566 ATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATC 11625 | || | | ||| | | ||||| |||||||| || || | |||||||| Sbjct 485 ACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTGAGG 544 Query 11626 GTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAACGCTTCTTACCGACAG 11683 ||||| || ||||| |||||| | | ||| || || ||||| ||||| | Sbjct 545 GTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCACGCTGGCGGCCGACCG 602 Query 11684 CGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTT 11743 |||| |||||||||||||| | ||| || || ||| || | ||||| | | Sbjct 603 CGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACATGT 662 Query 11744 CACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA-ACAC 11802 | || || || ||| || || || ||||||||||| ||||||| | | | || | | Sbjct 663 CGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGATGC 722 Query 11803 TGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTA 11862 |||| ||| || || || | ||| || |||||| | || || || ||||| || || Sbjct 723 TGAA-GAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCGGTC 781 Query 11863 CCAGG 11867 || || Sbjct 782 CCCGG 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588953361235000