Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2550 129 7e-25 seq2473 116 4e-21 seq573 96.9 4e-15 >seq2550 Length=338734 Score = 129 bits (142), Expect = 7e-25 Identities = 694/1086 (64%), Gaps = 40/1086 (4%) Strand=Plus/Plus Query 105558 TGAACTGAATTGGGCGC-GCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||||||||| ||| | |||| | | |||||||||||||| || ||||| | Sbjct 313349 TGAACTGAATTGG-CGCAGAAGCTGCCATCGTACGGAGATAGTACATGCCTGTCTTCAAA 313407 Query 105617 CCTTGTTTCCA-CGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCAT 105675 || | ||||| | || | | ||||| || || ||| ||| || || |||| | Sbjct 313408 CCAAGCTTCCATCCCGCAAAG-TGCATGCTAGTGATTTTGCCCATGGTAGG---TTCCTT 313463 Query 105676 GAAAAGA---TTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATC 105732 || || || | | ||| |||||||||||| ||| || | || |||| | Sbjct 313464 GAGGTGAATGTTGAGAGATTGGGACTGGTCAATGAATGCACCCCGATCGGCAGCCAGTTG 313523 Query 105733 AATGACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCT 105790 ||| | | ||| | ||| | ||||| ||||| ||||||| || ||||| | Sbjct 313524 AATAA--TGGTTCTTTGTGAGATCTCCCATACTGTCTTGTAGAGAGCTTTAATATCTGCA 313581 Query 105791 GGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCC 105850 ||||| | || || || || | || || || | || || | | ||||| | Sbjct 313582 GGGATGTTTGGAATGTTCTGGACCGAGCCACCTTCAGCGATGATACGGTTTTTCATGTTG 313641 Query 105851 TTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAAC 105910 | |||||||| || | | | |||||| || | || | ||||||| | || Sbjct 313642 TCTGACCAAAGGCCGAGATCCACGAGATCCTTCAGAAGCCACGGATTGACAACCTGGAAT 313701 Query 105911 TCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATT 105969 || || || || || ||| ||| || ||||| | ||||| |||||||| ||||| || Sbjct 313702 TCACCTGCAAGAACTCGTCT-AGAGTAAATGTTTGATGTGTATGGTTCAAAACATTCGTT 313760 Query 105970 ATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAA--AAGACTGTTA 106027 | || | || || ||| |||||||||||| || || | ||| ||| || ||| Sbjct 313761 AAATCCGAGAATCTGACTTGTGCTGGCTGTTGGCATAGGAGCGA-CAAGCAAG-CTATTA 313818 Query 106028 CGAAGACC--CTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT--CGTAGTTGAGCTT 106083 || | ||| |||| | || ||| ||||| | |||||| | | || | || | Sbjct 313819 CGCACACCATGTTTTGCAATATCTGTT--TTGAGCAAATCCCAATCCCAAAGATCAG-TA 313875 Query 106084 GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAA 106143 || |||| || |||||||||| |||| | || || | || |||||| || ||| | Sbjct 313876 GGCGTCACGTT-CCACATATCATATTGCAAAACGCCCTTAGAAACGGGAGAGCCTTCATA 313934 Query 106144 TGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 106203 |||||||||| ||| | ||| || | || ||| ||| || | |||||||| Sbjct 313935 GGTCTCATAGGGACCGTCAACTTTGGCTAGGTCGCAGGACGCGGTCAAAGCGGCGTGATA 313994 Query 106204 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCG 106263 |||||||| || || | ||||| || ||| || || ||||| || | | || Sbjct 313995 AATGGTTTCGAATATCTGGATATTCAGCTGCTTTGCCTCTGGGGAATCGAACGGCAATCG 314054 Query 106264 GCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCAT 106323 | || || |||| || || || || ||||| | | || || | || || | Sbjct 314055 CAAAGCAAGGAAAGCATCGGCAAGGCCCTGCACACCGACGGCGATTGGACGATGACGGAA 314114 Query 106324 ATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAG 106380 ||| |||||| || ||| ||||||||| || | ||||||| | ||| | Sbjct 314115 GTTACTCTTTCGGGC---TTCAGGGACGGGATAATGGTTGTTATCAATGATTTTGTTCAA 314171 Query 106381 ATTTTTGGTAAC---AATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 | ||| ||| || | ||| | || || | || || | ||| | || | Sbjct 314172 A---TTGCGAACGAGAACTTGTGTAACCTCGTGTAACTTGCCAAAGTCATACTCGCCACG 314228 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | | |||||| | || || || | ||||| | |||||||| || ||||| Sbjct 314229 GACGGGGTCGACATATGTGGGCAGCGCAAGAGATGCTAGGTTGCAAACCGCAACTTCATC 314288 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 |||||||| | ||||| || ||||||||||| || |||||| || | || Sbjct 314289 TGGCGAGGTGTACTCGATGATTTCCGTGCACAAGTTGGAGCTACGAATCGTTCCGAGGTT 314348 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 || ||||| || || |||||| || ||||||||||||||| |||| | || ||||| Sbjct 314349 TTTCTGGTTGCTTTTGCGGTTGCATGCGTCCTTGTAGAGCATGAAGGGATTTCCGGTCTC 314408 Query 106618 CGTCTG 106623 || || Sbjct 314409 GGTTTG 314414 >seq2473 Length=337605 Score = 116 bits (128), Expect = 4e-21 Identities = 298/455 (65%), Gaps = 18/455 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| ||||||||||||||||||||||| ||| | || || || |||||| Sbjct 140601 TAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACCAGCCAGCGAGATATTGTCCATA 140542 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCA----CCCCAACTTGTTTG 117096 ||||| ||||| || | || || | | | | || || || ||| Sbjct 140541 AAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTTGCCAAGAGCCACAA-------- 140490 Query 117097 AGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATG 117156 | | || || | || |||| ||||| | |||| || |||||||| || | Sbjct 140489 -GCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGAGTTCATTCCAAGC 140431 Query 117157 AGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACG 117216 ||| ||| ||||| || || | ||| | |||||||| ||||| |||||| | | Sbjct 140430 AGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAACTGCCTCTGTGATA 140371 Query 117217 ATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 ||||| | | | | || | |||| | || | ||| || ||| |||| Sbjct 140370 ATGGCTTCAACGGCCTGGGGACTGGGCCGATGATGCATGTGAGAAAACAGCAGGCAGGCA 140311 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || ||| ||||||||||| || || || | ||| || || ||| || || ||| Sbjct 140310 AAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGAAAAGGTAAGACCAGGC 140251 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396 || ||||| |||||||| | ||| |||| | ||| || ||| |||||| || ||| Sbjct 140250 ATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCCGCTGAAGAAAATTCCC 140191 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 || ||| ||||| |||| | ||||| |||||| Sbjct 140190 TCGACAGCAGCAAAGGCAATCAAGCGCTGGGCGAA 140156 >seq573 Length=143031 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 169182 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 169241 ||||| ||||| || ||| |||| ||| ||| ||||| ||||||||| | |||||| Sbjct 55335 AGACCTTTGATATGGCTACCGTCATGATCTTGATCAGTCATGATCATAAGATGGCCATAG 55276 Query 169242 CGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCTTGAGA 169301 ||||| | || ||| || ||| || || |||||||||| || |||| | Sbjct 55275 CGAAGCCCTCGCGTGTCCGTGTATTCCTTTTTGTGCTGCAGACCCAAGAAATTTTTGATA 55216 Query 169302 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTCTTACA 169360 | ||||| |||||| || | || ||| | || || |||||||||||||| Sbjct 55215 TT-TTGAATCTCTTGATTCTTGGAGATCTGGTCAACAGATGCGTCGCGGACATTGAGTAG 55157 Query 169361 CTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGAC 169420 ||| || || || || ||||||||| || |||| ||||| || | || || | Sbjct 55156 CTTTCCTCGAAGGGGGAAGACGCCAAAGAGATCGGCGCCAACAACAGCTCTTCCAGCCAT 55097 Query 169421 CGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACA 169465 ||||| || || ||||| || || |||| |||||| ||||| Sbjct 55096 TGCAAGACCCTTGGCAGAATCTCCTTCGGTGAGAATGAGTGTACA 55052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589958122613000