Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2726 168 1e-36 seq1061 125 2e-23 seq2257 113 1e-19 >seq2726 Length=527079 Score = 168 bits (186), Expect = 1e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | ||| |||||| ||||| ||||| || ||||||| ||| || | || Sbjct 136293 TCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCC 136352 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| |||||||| || || |||||||||||||| |||||||| ||||| |||||||| Sbjct 136353 ATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTT 136412 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||| ||| ||| || || || || |||||||| || ||||| || || | Sbjct 136413 ATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAACTTCCAGCGTGAT 136472 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || | ||||| ||||| | ||||| Sbjct 136473 CGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 149 bits (164), Expect = 1e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| |||||||| || || |||||||| || ||||| | ||||| | || || || Sbjct 136755 AACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTC 136814 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || | ||||| ||||| |||||||||||||| ||||| || Sbjct 136815 GAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 136874 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || || || || || ||||| |||||||| | ||||| Sbjct 136875 AATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTT 136934 Query 195111 TCCTGTCAAAGTTTTTACGA 195130 ||| || | ||| || |||| Sbjct 136935 TCCGGTAAGAGTCTTGACGA 136954 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||||||||||||||||||||| | || || | ||||| || Sbjct 136528 ACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCA 136587 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || || || | |||||||| ||||| ||||| ||||| || |||||| Sbjct 136588 AGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGA 136647 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || || || || || ||||| || ||| ||||| | |||| || || Sbjct 136648 ATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTG 136707 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||||| ||||| | |||||| Sbjct 136708 CCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 >seq1061 Length=321426 Score = 125 bits (138), Expect = 2e-23 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| |||||||| || ||||| |||||||| | |||||| | || || ||| Sbjct 107732 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCG 107791 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||||||||| ||||||||||| || || |||||||| |||||||| || |||||| Sbjct 107792 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 107848 >seq2257 Length=132105 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| ||||| |||||| | ||| | || |||||||||||||| || |||||||| Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | |||||| || ||||| || ||||| || ||||||||||| || ||| || || || Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCG 93678 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 || ||||| ||| ||||| |||||||| | ||||| || || | || || ||| Sbjct 93677 ATTGTGTCGCTCGA---CTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACG 93621 Query 195130 AA 195131 || Sbjct 93620 AA 93619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109437888158525