Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2726 149 4e-31 >seq2726 Length=527079 Score = 149 bits (164), Expect = 4e-31 Identities = 179/237 (76%), Gaps = 10/237 (4%) Strand=Plus/Plus Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810 ||| || || | ||| ||||| |||||||| | ||||||||||||||||||||||| || Sbjct 136278 ATTACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATC 136337 Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870 ||||| | || |||| || ||||| ||||||||||| || ||||||||||||||| | Sbjct 136338 GGAAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGG 136397 Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGGATGCTATCGAT--TCACCG-- 34925 || | || || || || |||||| ||| || || || | ||||| | ||| Sbjct 136398 TGGAATACCTTCTTTATCTTGAATCTT-TGTCTTAAC--AT--TGTCGATTGTGTCCGAT 136452 Query 34926 GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | |||||| || | || || |||||||| ||||| || ||||| || ||||||||| Sbjct 136453 GACTCAACTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCATA 136509 Score = 132 bits (146), Expect = 3e-26 Identities = 159/214 (74%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||||||||| ||||| |||||| |||| |||| || Sbjct 137056 AACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCTTC 137115 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || ||||| || | ||||||||||| | || | ||||||||||| Sbjct 137116 AAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTG 137175 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||||| || |||| || |||| | ||| || |||| ||| |||| Sbjct 137176 GATCTTGGTCTTGAC--AT--TATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGG 137231 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||||||| || ||||| || ||||||||||| Sbjct 137232 TCTTTCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324621433848600