Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq426 156 3e-32 seq2726 140 3e-27 seq480 87.8 1e-11 >seq426 Length=421947 Score = 156 bits (172), Expect = 3e-32 Identities = 460/703 (65%), Gaps = 11/703 (2%) Strand=Plus/Plus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 ||||| |||||||| | ||||| ||||| | ||||| || ||||||| |||| | Sbjct 179878 GCTCTCCGTCGTCTTCGCACTGCCTGCGAGCGTGCCAAGCGCACTCTTTCTTCTGCCGCC 179937 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || || | |||||| | ||||| | || ||||| || || | | || |||| | Sbjct 179938 CAGACTTCCATTGAAATTGATTCTCTCTTCGAGGGTATCGACTTCTACACTTCTATCACC 179997 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | || || ||||| |||| || ||||| | || || || || || || Sbjct 179998 CGTGCTCGTTTCGAAGAGCTTTGCCAGGACCTCTTCCGCTCCACCATGGAGCCTGTTGAG 180057 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | || | | ||| | ||||||||||||||| || || ||||| || | |||||| Sbjct 180058 CGTGTCCTCCGTGATGCCAAGATTGATAAATCCTCCGTCCACGAAATCGTCTTGGTTGGT 180117 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAA 552191 || ||||| | || ||||| || | | ||| | ||| || |||||||| || Sbjct 180118 GGTTCTACCCGTATCCCTAAGATCCAGAAGATGGT---TTCCGATTTCTTCAATGGCAAG 180174 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCA 552251 || || || | || || ||||||||||| |||||||| ||||| | || || Sbjct 180175 GAACCCAACAAATCCATCAACCCCGATGAGGCTGTCGCCTATGGCGCCGCTGTCCAGGCG 180234 Query 552252 GCTATTCTTTCTGGACA-AACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTT 552308 ||||| | ||||| | | || | || |||| || | || | ||| | |||||| Sbjct 180235 GCTATCTTGTCTGGTGACACCTCTTCCAAGTCTACTAATGAAATCCTCCTTCTCGATGTT 180294 Query 552309 ACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGA 552368 | ||||| ||| | ||| | ||||| | ||||||| | |||||| ||||||| | | Sbjct 180295 GCCCCTCTTTCTTTGGGTATCGAAACTGCTGGAGGTGTCATGACTCCTCTTATCAAGCGC 180354 Query 552369 AATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACT 552428 || || ||||| || || || || || || || | || || || || || Sbjct 180355 AACACCACTATCCCAACCAAGAAGTCCGAAACCTTCTCCACCTTCTCTGACAACCAGCCT 180414 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 | |||| || ||| | | || || ||| | || || ||||| || || Sbjct 180415 GGTGTTTTGATCCAAGTGTACGAGGGTGAACGTGCTCGTACCAAGGATAACAACTTGCTC 180474 Query 552489 GGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 ||| | || || ||| || |||||||| || |||||||| || || || || ||||| Sbjct 180475 GGTAAATTCGAACTTA-CTGGAATTCCTCCCGCCCCTCGTGGTGTTCCTCAGATCGAAGT 180533 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 ||||| ||| | |||||||| || || |||| || ||||| Sbjct 180534 CACTTTTGATCTTGATGCCAACGGTATCATGAACGTCTCTGCT 180576 Score = 122 bits (134), Expect = 7e-22 Identities = 319/482 (66%), Gaps = 5/482 (1%) Strand=Plus/Plus Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 |||||||||| ||||| || || |||||| |||| || || || | || ||||||| | Sbjct 179180 TTGAAATTATCGCCAACGACCAGGGTAACCGAACCACCCCTTCGTTCGTGGCTTTCACAG 179239 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | || || | || | |||||||| ||||| | |||| | || || | ||| | Sbjct 179240 ATACCGAGCGATTGATCGGTGATGCCGCAAAGAACCAAGTTGCGATGAACCCCATCAACA 179299 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 | |||| ||||| || ||| | || || | | || || || | || ||||| | Sbjct 179300 CAGTTTTCGATGCCAAGCGTCTCATCGGTCGTAAATTCAACGACGCCGAGGTCCAGGCTG 179359 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CT 550291 ||||||| || | || ||| | || | | | ||||| ||| || ||| | Sbjct 179360 ATATGAAACACTTCCCGTTCAAGATCATCGACAAAGCCGGAAAGCCTGTCATCCAAGTCG 179419 Query 550292 ACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | | | |||| | ||| || || | || || |||| || |||||||| || | Sbjct 179420 AAT--TCAAGGGCGAGACAAAGCAGTTCACTCCTGAGGAAATCTCCTCTATGGTCTTGAC 179477 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 || |||| | | || ||| ||| | ||| || | | || || | || Sbjct 179478 TAAGATGAGAGAGACTGCCGAATCTTACCTCGGTGGCACCGTCAACAACGCCGTTGTTAC 179537 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| || || || || || ||||| |||||||||||||| || ||||| || | |||||| Sbjct 179538 TGTTCCTGCCTACTTCAACGACTCTCAACGTCAAGCTACCAAGGATGCCGGTCTTATTGC 179597 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 || ||||| || || ||||||||||| || || |||||||| || |||| || || || Sbjct 179598 CGGTCTTAACGTCCTCCGTATTATCAACGAGCCCACTGCTGCCGCCATTGCTTACGG-CT 179656 Query 550531 TG 550532 || Sbjct 179657 TG 179658 >seq2726 Length=527079 Score = 140 bits (154), Expect = 3e-27 Identities = 165/219 (75%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 563260 CGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTG 563317 || || ||||| || || || ||| | |||| |||||||||||||| || || | Sbjct 136522 CGAAGGACAAGGTGCAGAGTCGACTCTTTTTG--AATATTGTAATCAGAGAGTGTACGGC 136579 Query 563318 AATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTT 563377 ||| |||||||| |||||||||||||| | | ||| ||||| || ||||||||||| | Sbjct 136580 CATCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCT 136639 Query 563378 TATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTA 563436 ||||||||||||| |||||| || ||||| || | | || | | ||| | ||| Sbjct 136640 TATCTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAG-GATTCAACTTCCAATGTA 136698 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | |||||| || || || ||||| ||||||||||||||| Sbjct 136699 ATAGTTTTGCCGGTCAGGGTTTTCACGAAAATTTGCATA 136737 Score = 125 bits (138), Expect = 6e-23 Identities = 156/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || || || |||||||| ||| || ||||| | || || | |||||||| Sbjct 136302 CAAG-TGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCCATCTTCAA 136360 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || ||||||||||| ||||||| |||||| || || ||||| |||||||||||||||| Sbjct 136361 GCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTTATCTTGAA 136420 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTA 563445 | ||| || || || ||||| || | ||| | | ||| || || | ||||| Sbjct 136421 TCTTTGTCTTAACATTGTCGATTGTGTCCG-ATGACTCAACTTCCAGCGTGATCGTTTTT 136479 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || ||||| |||||||| |||||| Sbjct 136480 CCAGTGAGTGTTTTCACGAAAATCTGCATA 136509 Score = 93.3 bits (102), Expect = 3e-13 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||||||||| ||| ||| || ||| || ||||||| ||||| | Sbjct 136746 GAGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCG 136805 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 || || || || || ||||| ||||| | | |||||| ||||||||||| ||||| Sbjct 136806 GCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTC 136865 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || ||||| || || || || || ||||||| ||| | || || || | Sbjct 136866 CTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTATCAG-ATGACTCCACCTCAAGGG 136924 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 | | || || || |||||||| || |||| Sbjct 136925 TGATGGTCTTTCCGGTAAGAGTCTTGACGA 136954 >seq480 Length=190759 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| ||||| || || ||| | ||||| || |||||||| ||| ||| Sbjct 35569 ACCGTCCCAGCGTATTTCAACGATAATCAAAGGCAAGCCACCAAAGATGCCGGAATAATT 35510 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||| | || || || ||| || ||||||| ||||| || || || |||| |||||| Sbjct 35509 GCCGGATTGAACGTCCTCCGTGTTGTCAATGAGCCTACCGCAGCCGCTATTGCTTATGGA 35450 Query 550529 CTTGATAA 550536 |||||||| Sbjct 35449 CTTGATAA 35442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029133380131750