Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq1153 109 2e-19 seq1948 93.3 1e-14 >seq1153 Length=764 Score = 109 bits (120), Expect = 2e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 5527 CAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGTTCCGTCCA 5586 ||||| ||| ||||| ||||| |||||||| ||||||||||| | || | | Sbjct 759 CAGCACGTATTCGGGGCTGCCGCAGCCCATCTTCGTGCCGTCCTTCAGCATCTCGCTGTA 700 Query 5587 CGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTCTTCATGCC 5646 ||| ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||||| Sbjct 699 CGACAGGCGGTAGGTCTGGTTGTTCTCGCGCACGACGTCGGTGACGACGGTGATCATGCC 640 Query 5647 CATATAGGCCCAGCCATGCTTGACGAAG-GCTCGAGTCACTTCCATGTGGAAGGGGTAGA 5705 ||| | |||| || | || |||||| ||||| |||||| || | || Sbjct 639 CATGAACTGGAAGCCGTGGCGCATATAGTGCTCGATGCACTT-GGCGTGGAACGGATTGA 581 Query 5706 CGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTCAC 5757 ||||| | | || |||||||| | | ||| | ||| || |||||||| Sbjct 580 CGGTCGGCACACCCTCGCCGGTCACTGCACCGAACAGGATCCGGTCCTTCAC 529 >seq1948 Length=731 Score = 93.3 bits (102), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 21401 GCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCG 21460 || ||||||||||||||||| || ||||||||| | ||||||||||| |||| || | Sbjct 3 GCCATCGAGCAGGACGCCGACGTCATCATGTTCATCTACCGCGACGACTACTACAACAAG 62 Query 21461 GATACCCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514 || || || | | ||||||||| ||| |||||||| ||||| || || ||| Sbjct 63 GACTCCAAGGAGCCCGGCGTGGCCGAGGTGATCATCAGCAAGCAGCGGAATGGC 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157104663015550