Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq2035 89.7 9e-13 seq72 87.8 3e-12 >seq2035 Length=1397 Score = 89.7 bits (98), Expect = 9e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 113546 CCAGGAAGGGGTTCTTCACGGGGAAGGAGCCCGACAGCGTCTTATGCAGATAGGCGTTGG 113605 |||| | |||||||| || | ||| ||||||||||||||| || ||| ||||| Sbjct 180 CCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGG 121 Query 113606 CGCGCCACGGCTCGATCGACGGCGAGGTATTGCCGCAGAGGATAGACGACGACGCGTTGG 113665 | | ||||||||| | | |||||| |||||||| ||| || ||||||| ||| Sbjct 120 CCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGG 61 Query 113666 GAGCGATCGCCATCTTG 113682 | ||||||||||||||| Sbjct 60 GCGCGATCGCCATCTTG 44 >seq72 Length=626 Score = 87.8 bits (96), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 132949 GCTCCAAGTTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGG 133008 ||| ||||| || |||||||||||||| |||||||||||| ||||||||||| |||| Sbjct 539 GCTACAAGT--GACGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGG 596 Query 133009 TCGAGGGTTCAAATCCCTCCCCCGCATCCA 133038 || ||||||||||| ||||||| ||| Sbjct 597 TCACAGGTTCAAATCCTGTCCCCGCAACCA 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895731968979000