Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq2534 138 2e-27 >seq2534 Length=3601 Score = 138 bits (152), Expect = 2e-27 Identities = 533/819 (65%), Gaps = 40/819 (5%) Strand=Plus/Minus Query 83276 CCGGCGGTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGAC 83335 ||| | |||||||||||||||||| ||||||||| | |||| |||||| | ||||| || Sbjct 888 CCGCCAGTCGGCGATGTAGCGGATATACTTCTTGATATCCTTGGGCGTCATGCCGTTCAC 829 Query 83336 CTCGCCCAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCATCCGGCGGCC 83395 | |||| ||||||| |||||||||| ||| || || || | ||| Sbjct 828 CGGCCCCATCTCGAAGGCGAGGTCGATGAAATTGTCCTCGAGCCGGATGGTGGTCTGGCA 769 Query 83396 GGCGTCGTAGATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGATCAA 83455 | ||| ||| | ||| | | | | || |||| | | |||||| | || Sbjct 768 CACATCGGCAATGTCGTCCTTCACCGCCTTGGTC-AGGCACT--GACGCTCCTGGCAGAA 712 Query 83456 CTCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTC 83515 |||| | | ||| |||| |||| || || |||||||||| | |||||| Sbjct 711 GGCGTGGAACATGCGGATGATGCCCTCGCAATGCAGGCTCTCGTCGCGCACCGACCAGCT 652 Query 83516 GACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAA 83575 ||||||| ||||||||||||| | | ||| | ||||||| |||| ||||| Sbjct 651 GACGATCTGCCCCATGCCCTTCATCTTGTTGAAGCGCGGAAAGTTCATGAGCATCGCGAA 592 Query 83576 CGAGGAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGGCGATGTCGACGATCAG 83635 ||| | ||| ||||||| ||| ||| |||| | ||||| ||||| || || | Sbjct 591 CGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGCGAG-----CG-TCCG 538 Query 83636 GTCGGCGATCGACGTGCCGCTCTCG-CGCTCGAA------CATGTACTCGTGCTTTTCAC 83688 | || ||| | | |||| ||| ||| |||| |||||| || ||||| || Sbjct 537 GGCGAT-ATCCTCAT--CGCTGTCGACGC-CGAAGTTCTGCATGTAATCATGCTTGTCCT 482 Query 83689 GCATCGCCTGATAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGA 83748 || | | ||| || ||||| |||| | ||| || |||| ||| | ||||||| Sbjct 481 TCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCATGCCGATCGTGTCGA 422 Query 83749 TCAGGGTGGC-GTAGGCGNNNNNNNNNNNNNNNTCG--GCCGCCATGAACGAGGCCAGCA 83805 |||| |||| |||||| || | || |||||| || ||||| Sbjct 421 GCAGG-TGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGC--TGAACGCGGTCAGCA 365 Query 83806 TCATCCGCACCTCCGGGTGCGGGAAG-CGCGGGCCGTACTTTTCGAAGTAGCCGCGCGCC 83864 ||||| | ||| | || ||| ||||| ||||| || ||| |||| | | Sbjct 364 TCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGATAGCAATCCTGC 306 Query 83865 ACATCGACGTCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAAGCTGGTTCTTCTCGCTG 83924 || ||||| || |||||||||||||||||||||| ||||| ||| |||| |||| || Sbjct 305 ACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGGTTGCGCTCG-TG 247 Query 83925 GGC-TTGAGCTTCTCGTTCCAGTCCTGGATGTCGGTGTCCATCGGCGCCTCGTGGGGGAG 83983 | | ||||||| ||| || || || | ||| |||| | || | || || Sbjct 246 ATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCCCAGCGGCACTTCCTCAGGCAG 187 Query 83984 CCAGTGGAGCGATTGCATGA----TCCGGTAGGCGTCGTAGGCCCAGGGGTAGGCGAAGG 84039 |||||||||| ||| ||| ||| || ||| | |||||||| || |||| | Sbjct 186 CCAGTGGAGCTGCTGC-TGACGCTTCCAATA---TTCGAACGCCCAGGGATATTCGAAAG 131 Query 84040 GCTTGTAGTAGTCGCGCGGCTTG-AGCAGGGACATGTGT 84077 ||||||| | | | | |||||| || |||| |||| || Sbjct 130 GCTTGTACTGCTTG-GAGGCTTGAAGGAGGGGCATGGGT 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715748487360000