Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2473 116 7e-21 seq2550 107 4e-18 >seq2473 Length=337605 Score = 116 bits (128), Expect = 7e-21 Identities = 176/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| || || | |||||| || ||||||||| ||||| ||| | ||||| | Sbjct 139955 TCTCGGAATGGATATTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCTGGAA 139896 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| ||||| | | ||||||||| | |||||||||||||| || ||||| || || | Sbjct 139895 TCTGAACTTCAGCGCTGAATCTCTCGACAAGATTCTCATTGACGATGCCATCGGAGGCGG 139836 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605 | |||||||| ||||| | | ||| | ||| || | || | | | || |||| Sbjct 139835 CGAAGAAGGCCAGGACGCGAGAGATGAAGTAGCGTTCATCGTCGTTCAGTCGATGGTTCC 139776 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | |||||| || || | |||||| ||||||||||||| || |||| Sbjct 139775 AGTCATGGAGATCTTTGGACAAATCGATTTCTTCAGCAGTCCAGAAGGATGCTTCGGCTT 139716 Query 48666 TTTTGTACAT 48675 |||||||||| Sbjct 139715 TTTTGTACAT 139706 >seq2550 Length=338734 Score = 107 bits (118), Expect = 4e-18 Identities = 479/747 (64%), Gaps = 35/747 (5%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 || ||||| | |||||| ||||||| || || | || ||||| |||||| ||||| Sbjct 313684 GGATTGACAACCTGGAATTCACCTGCAAGAACTCGTCTAGAGTAAATGTTTGATGTGTAT 313743 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || || | | ||||| || |||||||| ||||||||||| ||||| ||||| Sbjct 313744 GGTTCAAAACATTCGTTAAATCCGAGAATCTGACTTGTGCTGGCTGTTGGCATAGGAGCG 313803 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 || || | || || | ||| || || | | || ||| |||| ||| Sbjct 313804 ACAAGCAAGCTATTACGCACACCATGTTTTGCAATATCTGTTTTGAGCAAATCCCAATCC 313863 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || ||| ||| | ||||||||||||| ||| | ||||| | ||| || Sbjct 313864 CAAAGATCAGT-AGG--------CGTCACGTTCCACATATCATATTGCAAAACGCCCTTA 313914 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 ||||| ||| | || | ||||| || | | ||||| || ||||||||| Sbjct 313915 GAAACGGGAGAGCCTTCATAGGTCTCATAGGGACCGTCAACTTTGGCTAGGTCGCAGGAC 313974 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || || |||| || |||||||| ||||||| | || |||| ||| |||||| Sbjct 313975 GCGGTCAAAGCGGCGTGATAAATGGTTTCGAATATCTGGATATTCAGCTGCTTTGCCTCT 314034 Query 213267 GGGGACGTGAAGGGC-ATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 ||||| ||| ||| ||| | || |||| |||| || || ||||| || |||| Sbjct 314035 GGGGAATCGAACGGCAATCGCAAAGC-AAGGAAAGCATCGGCAAGGCCCTGCACACCGAC 314093 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 | |||| || | || | | |||| ||| | || | ||| ||| |||| Sbjct 314094 GGCGATTGGACGATGACGGAAGTTACTCTTTCGGGCTTCAGGGACGGGATAATGGTTGTT 314153 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTG 213445 || ||||| ||||| | ||||| | |||| || || | | | ||| | Sbjct 314154 ATCAATGATTTTGTTCAAATTGCGAACGAGAACTTGTGTAACCT---CGTGTAACTTGCC 314210 Query 213446 ATTG-AACACGTAGCCCC---CGTCCTGCACAAACTCAGGCAGGGC----GATGCTGGCC 213497 | | | || | ||| | || | ||| | ||||| || |||||| Sbjct 314211 AAAGTCATAC-TCGCCACGGACGGGGTCGACATATGTGGGCAGCGCAAGAGATGCT---- 314265 Query 213498 AGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 ||||||||||| || || || | | ||| |||||||| ||||| || ||||||| | Sbjct 314266 AGGTTGCAAACCGCAACTTCATCTGGCGAG---GTGTACTCGATGATTTCCGTGCACAAG 314322 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCTT 213613 ||| || || || || || ||||| | ||| ||| |||||| | ||| | ||||| Sbjct 314323 TTGGAGCTACGAATCGTTCCGAGGTTTTTCTGG-TTGCTTTTGCGGTTGCATGCGTCCTT 314381 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTC 213640 |||||||||| |||| |||||||| Sbjct 314382 GTAGAGCATGAAGGGATTTCCGGTCTC 314408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931496994208000