Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq2095 109 9e-19 seq1433 105 1e-17 seq1 87.8 3e-12 >seq2095 Length=1157 Score = 109 bits (120), Expect = 9e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| || ||||||||||| || | |||||| || ||||| || || ||| Sbjct 517 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 576 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 | || |||||| || |||| ||||| || | ||||| ||||| |||||| ||| | Sbjct 577 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 636 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 ||||||||||| ||||| |||||| | | | ||| | || ||| ||||| ||| Sbjct 637 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 696 Query 122600 TGGGATGAATGGGCAGATGA 122619 ||||| |||||||| ||||| Sbjct 697 TGGGACGAATGGGCGGATGA 716 >seq1433 Length=2545 Score = 105 bits (116), Expect = 1e-17 Identities = 164/235 (70%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 122424 GTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAAG 122483 |||| |||||| ||| | ||| ||||| || ||||| || |||||| | | | Sbjct 1309 GTACCGGCACGCGCAGCGTGT------TCGGCTACCAGATGCGGTTCGACCTGAACGATG 1362 Query 122484 GTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGT 122543 | ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct 1363 GCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGT 1422 Query 122544 GGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGG 122603 ||||||| |||| | | ||| | | | ||| || | ||| | ||||||| Sbjct 1423 GGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGG 1482 Query 122604 ATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 | |||||||| || || || | || || ||||||||||| ||| ||||| Sbjct 1483 ACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 1537 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 123072 TGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTG 123131 |||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| | Sbjct 1717 TGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 1776 Query 123132 CCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACT 123191 || |||||||| || | |||||| | || |||||| | | |||| || || |||| Sbjct 1777 CCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACT 1836 Query 123192 TC 123193 || Sbjct 1837 TC 1838 >seq1 Length=500 Score = 87.8 bits (96), Expect = 3e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||| ||||||||| |||| | ||| ||||||||| |||||||||||||||||||||||| Sbjct 315 GTAGTTCAGTTGGT-TAGAATACCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 373 Query 169793 TCAGTCCTGCCAT 169805 ||| || ||||| Sbjct 374 TCACTCGCGCCAT 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777602109770000