Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq426 168 4e-36 seq2726 134 9e-26 >seq426 Length=421947 Score = 168 bits (186), Expect = 4e-36 Identities = 456/692 (66%), Gaps = 7/692 (1%) Strand=Plus/Plus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 |||||| | ||||| || || ||||| ||||| ||||||||||||| | || ||| | Sbjct 179887 CGTCTTCGCACTGCCTGCGAGCGTGCCAAGCGCACTCTTTCTTCTGCCGCCCAGACTTCC 179946 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 ||||| |||||||||| || || || || || | | ||| ||| || | ||| Sbjct 179947 ATTGAAATTGATTCTCTCTTCGAGGGTATCGACTTCTACACTTCTATCACCCGTGCTCGT 180006 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| |||| || ||||| | || || || || ||||| | || ||| Sbjct 180007 TTCGAAGAGCTTTGCCAGGACCTCTTCCGCTCCACCATGGAGCCTGTTGAGCGTGTCCTC 180066 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| | || |||| ||||| ||||| ||||| || | || || ||||| || Sbjct 180067 CGTGATGCCAAGATTGATAAATCCTCCGTCCACGAAATCGTCTTGGTTGGTGGTTCTACC 180126 Query 475727 AGAATTCCAAAAAT-AAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGA 475785 | || || || || ||| | ||| |||| | || ||||| || | || | Sbjct 180127 CGTATCCCTAAGATCCAGA-AGATGGTTTCCGATTTCTTCAATGGCAAGGAACCCAACAA 180185 Query 475786 AAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC 475845 | | || || ||||| ||||| || ||||| || |||||||| || ||||| || || Sbjct 180186 ATCCATCAACCCCGATGAGGCTGTCGCCTATGGCGCCGCTGTCCAGGCGGCTATCTTGTC 180245 Query 475846 AGGTCA---ATCAGACGAG-AAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTT 475901 ||| | || | || ||| ||| | || | ||| | || || | || |||| Sbjct 180246 TGGTGACACCTCTTCCAAGTCTACT-AATGAAATCCTCCTTCTCGATGTTGCCCCTCTTT 180304 Query 475902 CATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA 475961 | || ||| | ||||| | |||||| | |||||| |||||| | | || || ||| Sbjct 180305 CTTTGGGTATCGAAACTGCTGGAGGTGTCATGACTCCTCTTATCAAGCGCAACACCACTA 180364 Query 475962 TCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCA 476021 ||||| ||| || || || || ||||| | ||||| || || | ||| | Sbjct 180365 TCCCAACCAAGAAGTCCGAAACCTTCTCCACCTTCTCTGACAACCAGCCTGGTGTTTTGA 180424 Query 476022 TCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTA 476081 ||||| | | || |||||| | || || ||||| ||| || || | || Sbjct 180425 TCCAAGTGTACGAGGGTGAACGTGCTCGTACCAAGGATAACAACTTGCTCGGTAAATTCG 180484 Query 476082 ATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATA 476141 | ||| || |||||||| || || | || |||||||| || ||||| ||||||||| Sbjct 180485 AACTTACTGGAATTCCTCCCGCCCCTCGTGGTGTTCCTCAGATCGAAGTCACTTTTGATC 180544 Query 476142 TTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 ||||||| || ||||| | || || ||||| Sbjct 180545 TTGATGCCAACGGTATCATGAACGTCTCTGCT 180576 Score = 104 bits (114), Expect = 2e-16 Identities = 345/534 (65%), Gaps = 7/534 (1%) Strand=Plus/Plus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || ||||| ||||| ||||| |||| || || || | || |||| || || Sbjct 179182 GAAATTATCGCCAACGACCAGGGTAACCGAACCACCCCTTCGTTCGTGGCTTTCACAGAT 179241 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | | || || ||||| || || | |||| ||| || || | || || Sbjct 179242 ACCGAGCGATTGATCGGTGATGCCGCAAAGAACCAAGTTGCGATGAACCCCATCAACACA 179301 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 |||| ||||| || | | || |||||||| || | || || ||||| ||||| Sbjct 179302 GTTTTCGATGCCAAGCGTCTCATCGGTCGTAAATTCAACGACGCCGAGGTCCAGGCTGAT 179361 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| || | || || ||| | || | | || || || || ||| || Sbjct 179362 ATGAAACACTTCCCGTTCAAGATCATCGACAAAGCCGGAAAGCCTGTCATCCAAGTCGAA 179421 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || || || || || | || || |||| || || ||||| || | | Sbjct 179422 TTCAAG--GGCGAGACAAAGCAGTTCACTCCTGAGGAAATCTCCTCTATGGTCTTGACTA 179479 Query 474690 AAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749 | |||| | | || || || || || || || | | || || |||||| Sbjct 179480 AGATGAGAGAGACTGCCGAATCTTACCTCGGTGGCACCGTCAACAACGCCGTTGTTACTG 179539 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 |||| || || || || || |||||||||||||| || || ||||| || ||||| | Sbjct 179540 TTCCTGCCTACTTCAACGACTCTCAACGTCAAGCTACCAAGGATGCCGGTCTTATTGCCG 179599 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 ||||||| || | |||||||| || || || || || ||||| ||||||| || | | Sbjct 179600 GTCTTAACGTCCTCCGTATTATCAACGAGCCCACTGCTGCCGCCATTGCTTACGGCTTGG 179659 Query 474870 ATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920 | ||||| |||| || || ||||| || || |||| |||| |||| Sbjct 179660 ACAAGAAGCATGACGGTGAGCGCAACGTTTTGATTTTCGATTTGGGTGGTGGTA 179713 >seq2726 Length=527079 Score = 134 bits (148), Expect = 9e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 480558 CGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTA 480617 || || ||||| || || || ||||| || ||| ||||||| || || | | | Sbjct 136522 CGAAGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCA 136581 Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || |||||||||||||| |||||||| | |||||||||||| || |||||||||||||| Sbjct 136582 TCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTA 136641 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 |||||||| || ||| ||| || || || || | | | | ||| | |||||| Sbjct 136642 TCTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATA 136701 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||| || || || ||||||||||| Sbjct 136702 GTTTTGCCGGTCAGGGTTTTCACGAAAATTTG 136733 Score = 127 bits (140), Expect = 1e-23 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || ||||||||||| ||| ||| || || |||||||||| ||||| Sbjct 136744 CGGAGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTG 136803 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | || || || ||||| || || ||||| | |||||| || ||||||||||| ||| Sbjct 136804 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCT 136863 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 |||||||| |||||||| || || || |||||||||| || | | ||||| Sbjct 136864 TCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCA-CCTCAAG 136922 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||| || || || ||||| |||||||| |||| Sbjct 136923 GGTGATGGTCTTTCCGGTAAGAGTCTTGACGA 136954 Score = 113 bits (124), Expect = 3e-19 Identities = 151/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| || || || |||||||| || |||||||| | || || | | |||||||| Sbjct 136302 CAAG-TGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCCATCTTCAA 136360 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 | |||||||| ||||| ||||| ||||| || || || ||||| ||||| || ||||||| Sbjct 136361 GCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTTATCTTGAA 136420 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| || ||| || || || || | || | || ||| || || || ||||| Sbjct 136421 TCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAA-CTTCCAGCGTGATCGTTTTT 136479 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || |||||||| || Sbjct 136480 CCAGTGAGTGTTTTCACGAAAATCTG 136505 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || || | ||||| ||| || || || || || |||| || || Sbjct 137044 ACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGT 137103 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||||||||| || || |||||||| || | ||||| || |||||||| || || Sbjct 137104 TCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCC 137163 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729 ||||||||||| ||||| |||||| |||||||| ||| | | | | || | Sbjct 137164 CTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCA-CCTCGA 137222 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || || || ||||| ||||| || || Sbjct 137223 GGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTG 137262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268047298330100