Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2473 116 4e-21 seq2550 109 7e-19 >seq2473 Length=337605 Score = 116 bits (128), Expect = 4e-21 Identities = 298/455 (65%), Gaps = 18/455 (4%) Strand=Plus/Plus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 |||||| ||||| | |||| ||||| ||| ||||| || |||||| ||| || ||| Sbjct 140156 TTCGCCCAGCGCTTGATTGCCTTTGCTGCTGTCGAGGGAATTTTCTTCAGCGGCTCCTTC 140215 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | |||| ||| | |||||||| ||||| ||||| || || ||| || || ||| Sbjct 140216 GCTTCCATTTTCTGGCTAAAGAAGCGCGGTCTTATGCCTGGTCTTACCTTTTCGAACGAA 140275 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250 | || || || ||||||||||| ||| || |||||| ||| || || Sbjct 140276 TTGATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTGCTGTTTTCTCACATG 140335 Query 65251 CGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAG 65310 | | || | |||| | || | | | | ||||| | | |||||| ||||| |||||| Sbjct 140336 CATCATCGGCCCAGTCCCCAGGCCGTTGAAGCCATTATCACAGAGGCAGTTGAAATTGAG 140395 Query 65311 AAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATG 65370 || | ||| | || || ||||| ||| ||| | || |||||||| || ||| Sbjct 140396 AAGGAATTCTTGACCGATGCCCTCCCTTGTGCTCTGCTTGGAATGAACTCCAAGCTCATG 140455 Query 65371 TCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGG----TGCCACC 65426 | | ||||| |||| || | || || | | ||| || || || | Sbjct 140456 TGTCAATACATCGAGTTCGTTGCCGACCGGTTGC---------TTGTGGCTCTTGGCAAC 140506 Query 65427 CA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481 | | | || || | || ||||| ||||||||||| || || || | ||| Sbjct 140507 AAAAAGTTCTATAATGCCACTAACCCATTCGACTTTATGGACAATATCTCGCTGGCTGGT 140566 Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||||||||||||||||||||| ||||| || || Sbjct 140567 AAGACCAACTTCTTTGAGAAGCGTGTTGGTGATTA 140601 >seq2550 Length=338734 Score = 109 bits (120), Expect = 7e-19 Identities = 613/965 (64%), Gaps = 36/965 (4%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | ||||| || || | || || ||||| |||| || | ||||| |||||||| Sbjct 314435 TGGTATGCTATCCTAGAAGCTCAAACCGAGACCGGAAATCCCTTCATGCTCTACAAGGAC 314376 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || ||| || || ||||| || || | ||||| || ||||| || | ||| Sbjct 314375 GCATGCAACCGCAAAAGCAACCAGAAAAACCTCGGAACGATTCGTAGCTCCAACTTGTGC 314316 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 |||||||| | |||||||| ||||| || |||||||| | ||||| | Sbjct 314315 ACGGAAATCATCGAGTACACCTCGCCAGATGAAGTTGCGGTTTGCAACCTAGCATCTCTT 314256 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117 || || || | |||||| | | | || | ||| | || || | || || Sbjct 314255 GCGCTGCCCACATATGTCGACCCCGTCCGTGGCGAGTATGACTTTGGCAAGTTACACGAG 314196 Query 76118 ATCACAAAGATT---GTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 | ||| | || ||| ||| | | ||| | ||||||| | || ||||||| Sbjct 314195 GTTACACAAGTTCTCGTTCGCAA---TTTGAACAAAATCATTGATAACAACCATTATCCC 314139 Query 76175 GT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAA 76231 || ||| || |||||| ||| | || || | || || | | ||||| || Sbjct 314138 GTCCCTGAA---GCCCGAAAGAGTAACTTCCGTCATCGTCCAATCGCCGTCGGTGTGCAG 314082 Query 76232 GGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAG 76291 || || || |||| || || | || | | || ||||| || || ||| || Sbjct 314081 GGCCTTGCCGATGCTTTCCTTGCTTTGCGATTGCCGTTCGATTCCCCAGAGGCAAAGCAG 314022 Query 76292 ATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTG 76351 ||||| | || || |||||||| |||||||| | || ||| || || | Sbjct 314021 CTGAATATCCAGATATTCGAAACCATTTATCACGCCGCTTTGACCGCGTCCTGCGACCTA 313962 Query 76352 GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT 76411 || ||| | ||| |||||||||| | ||| || ||||||| || | || || | Sbjct 313961 GCCAAAGTTGACGGTCCCTATGAGACCTATGAAGGCTCTCCCGTTTCTAAGGGCGTTTTG 313902 Query 76412 CAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGG 76469 || | |||||||||| || |||| || | || | || | | |||||| | ||||| Sbjct 313901 CAATATGATATGTGG-AACGTGACGCCTA-CTGATCTTTGGGATTGGGATTTGCTCAA-- 313846 Query 76470 AACGCATCAAGGAGAAG--GGTCTTCGTAACAGTCTT--TTGATGGCACCAATGCCAACA 76525 ||| || | | || ||| | ||||| || ||| ||| | || || ||||||||| Sbjct 313845 AACAGATATTGCAAAACATGGTGTGCGTAATAG-CTTGCTTG-TCGCTCCTATGCCAACA 313788 Query 76526 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATC 76585 ||| ||| || || | || ||| ||||| ||||||||||||||| ||||||| Sbjct 313787 GCCAGCACAAGTCAGATTCTCGGATTTAACGAATGTTTTGAACCATACACATCAAACATT 313728 Query 76586 TACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGAC 76645 ||| ||| || || |||||||| || ||||||| | || | || || Sbjct 313727 TACTCTAGACGAGTTCTTGCAGGTGAATTCCAGGTTGTCAATCCGTGGCTTCTGAAGGAT 313668 Query 76646 CTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCAT-GGTGAAAGCGGG 76701 ||| | | | || || ||||| | | ||||| | | |||| | |||| || Sbjct 313667 CTCGTGGATCTCGGCCTTTGGTCAGACAACATGAAAAACCGTATCATCGCTGAA----GG 313612 Query 76702 TGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGT 76761 ||| || | || || || || | ||||| | ||||| || ||||||| ||||| Sbjct 313611 TGGCTCGGTCCAGAACATTCCAAACATCCCTGCAGATATTAAAGCTCTCTACAAGACAGT 313552 Query 76762 GTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 76819 ||||| | ||| | ||| | | ||| | |||| || ||||| ||| |||||| Sbjct 313551 ATGGGAGATCTCACAAAGAACCA--TTATTCAACTGGCTGCCGATCGGGGTGCATTCATT 313494 Query 76820 GATCA 76824 || || Sbjct 313493 GACCA 313489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596546669356000