Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq787 181 3e-41 >seq787 Length=7589 Score = 181 bits (200), Expect = 3e-41 Identities = 240/331 (73%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 40419 CCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATC 40478 ||| | ||||||||||| ||| ||| |||||||| | ||||||| ||| Sbjct 4854 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 4795 Query 40479 ACCTCGCCACGAC--GCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCT 40536 ||| | | || ||| | || |||||||||||||| || ||||| |||||||||| Sbjct 4794 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 4737 Query 40537 CGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCC 40596 | ||||||||||| |||||||| | || || || || || ||||||||||||||| Sbjct 4736 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 4677 Query 40597 CGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGC 40656 ||| ||||| |||||||| ||||| | || || || || ||||||||| | || Sbjct 4676 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 4617 Query 40657 CGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCA 40716 |||| | ||| |||||| ||||||||| | |||| ||||||||| ||||| |||| Sbjct 4616 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 4557 Query 40717 TCTGGATGATCATGTCGATCTCGTACTGGAG 40747 ||| | ||| | |||||||| ||| ||| Sbjct 4556 TCTTCAGGATGGTCCCGATCTCGAACTCGAG 4526 Score = 129 bits (142), Expect = 2e-25 Identities = 213/304 (70%), Gaps = 14/304 (5%) Strand=Plus/Minus Query 39361 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39420 ||||||| | ||||||| ||||||||| | ||| ||||||||| || |||||| | Sbjct 6005 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 5946 Query 39421 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACA------ 39474 | | ||||| |||||||||| ||||||| ||||| ||| || ||| | | Sbjct 5945 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 5886 Query 39475 CTGCCTGGATG-GCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39533 | |||| || | ||| | | | |||| ||||| | ||| |||| || | Sbjct 5885 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 5833 Query 39534 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCC 39593 | || ||||| |||||| |||||||||||||||||||||||| |||||||| || Sbjct 5832 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 5773 Query 39594 TGACCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATG 39653 || || ||||| ||| ||| || |||||| || | |||||| |||||||||| Sbjct 5772 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACC 5713 Query 39654 ATGA 39657 |||| Sbjct 5712 ATGA 5709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163878815644100