Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2550 122 3e-22 seq2473 111 5e-19 >seq2550 Length=338734 Score = 122 bits (134), Expect = 3e-22 Identities = 227/330 (69%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 |||||||| ||||| || || ||||| || || || ||||||| |||||||| ||||| Sbjct 314785 TTGCCACCTTGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATT 314844 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 ||||| |||| |||||| || || ||||| || |||| | || | | ||| | Sbjct 314845 CCATTAGAAGAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACG 314904 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 | || ||||||||||| | || ||||| | || || ||| | ||||| | || Sbjct 314905 TTAAGACCAATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAA 314964 Query 156240 ATACCTTCAATAGAATCAT-CTTC-CATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297 || || || || ||| | |||| || |||| ||| | || ||| | ||| || Sbjct 314965 ATGCCGTCGATGCTATCTTCCTTCATATCGATA--AGAAAACAAGAAGCCATTTGTGGCT 315022 Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATAT 156357 | || ||||| |||||||| || || |||| |||||| | ||| | || | ||||| Sbjct 315023 GGGGCGTTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCA 315082 Query 156358 AATCGTATGTCTCCTTAATCTTCTCAAGAT 156387 ||| || ||||| | |||||||| || Sbjct 315083 AATTATAGGTCTCAATGGCCTTCTCAATAT 315112 >seq2473 Length=337605 Score = 111 bits (122), Expect = 5e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| ||| ||||| |||||||||| ||| |||||||||||| || ||| Sbjct 140094 TTCCTTGCATTCGTAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGATCAGGAATCGA 140153 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 || || || | |||| ||||||| || ||||| ||||| ||||| || | | Sbjct 140154 CATTCGCCCAGCGCTTGATTGCCTTTGCTGCTGTCGAGGGAATTTTCTTCAGCGGCTCCT 140213 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 || || ||||| ||||| || ||||| ||| || | ||||| || ||||| |||| Sbjct 140214 TCGCTTCCATTTTCTGGCTAAAGAAGCGCGGTCTTATGCCTGGTCTTACCTTTTCGAACG 140273 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || | || || | || |||| |||||||| || |||||| Sbjct 140274 AATTGATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCC 140314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471759612686275