Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq787 187 8e-43 >seq787 Length=7589 Score = 187 bits (206), Expect = 8e-43 Identities = 241/331 (73%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 40167 CCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATG 40226 ||| | ||||||||||| ||| ||| |||||||| | ||||||| |||| Sbjct 4854 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 4795 Query 40227 ACCTCGCCACGAC--GCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCT 40284 ||| | | || ||| | || |||||||||||||| || ||||| |||||||||| Sbjct 4794 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 4737 Query 40285 CGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCC 40344 | |||||||||||||||||||| | || || || || || ||||||||||||||| Sbjct 4736 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 4677 Query 40345 CGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCC 40404 ||| ||||| |||||||| ||||| | || || || || ||||||||| | | Sbjct 4676 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 4617 Query 40405 CGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCA 40464 |||| | ||| |||||| ||||||||| | |||| ||||||||| ||||| |||| Sbjct 4616 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 4557 Query 40465 TCTGGATGATCATGTCGATCTCGTACTGGAG 40495 ||| | ||| | |||||||| ||| ||| Sbjct 4556 TCTTCAGGATGGTCCCGATCTCGAACTCGAG 4526 Score = 127 bits (140), Expect = 7e-25 Identities = 209/298 (70%), Gaps = 14/298 (5%) Strand=Plus/Minus Query 39109 ACTCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39168 ||||||||| ||||||| ||||| ||| | ||| ||||||||| || |||||| | Sbjct 6005 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 5946 Query 39169 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACA------ 39222 | | ||||| |||||||||| ||||||| ||||| ||| || ||| | | Sbjct 5945 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 5886 Query 39223 CTGCCTGGATG-GCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39281 | |||| || | ||| | | | |||| ||||| | ||| |||| || | Sbjct 5885 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 5833 Query 39282 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCC 39341 | || ||||| |||||| |||||||||||||||||||||||| |||||||| || Sbjct 5832 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 5773 Query 39342 TGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGA 39399 ||||| ||||| ||| ||| || ||| || || | |||||| |||||||||| Sbjct 5772 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGA 5715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163318836092850