Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_021538.1 Length=59626 Score E Sequences producing significant alignments: (Bits) Value seq1153 113 2e-20 >seq1153 Length=764 Score = 113 bits (124), Expect = 2e-20 Identities = 171/238 (72%), Gaps = 8/238 (3%) Strand=Plus/Plus Query 46739 GTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACGGTGTCACCC 46798 || |||||||| ||| ||||||| || ||||||| || ||||| || || || Sbjct 529 GTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCAATCCG 588 Query 46799 TTCCACGCCGAGGCGATCTTCCACGG-ACGCAAACACGGCTTCGACTACCTCGGCATGAT 46857 ||||||||| || ||| ||| | || ||||||||| | | | | |||||||| Sbjct 589 TTCCACGCCAAGTGCATCGAGCACTATATGCGC-CACGGCTTCCAGTTCATGGGCATGAT 647 Query 46858 CACCGTCATCACCGATGTGGTCCGGGAAAACAACCAGACGTACCGGCTGGGCTGGT-CAG 46916 ||||||| ||||||| || || || || ||||||||||| ||||| ||| | || ||| Sbjct 648 CACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TCGTACAG 704 Query 46917 AGCAGTGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATTCTGTTG 46972 | ||| || |||| ||| ||||||||| |||| ||| |||||| | ||| || Sbjct 705 CGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTGCTG 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190674637142200