Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3032 104 3e-16 seq2473 87.8 2e-11 >seq3032 Length=246154 Score = 104 bits (114), Expect = 3e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||||| |||||| | |||||||| | ||||||||| | || |||||| Sbjct 126744 GCAGCAAACTACCTCGATATCAAGGCCTTGCTCGATGTCGGGTGCAAGACCGTTGCCAAC 126685 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||| || || |||||||| ||| | |||||||| || || || ||| Sbjct 126684 ATGATAAAGGGAAAATCCCCCGAGGAAATCAGAAAGACCTTCAATATTCAGAACG 126630 >seq2473 Length=337605 Score = 87.8 bits (96), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||||||||| || | |||||||| Sbjct 140610 GCCTTCTGGTAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACCAGCCAGCGAGATA 140551 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| ||||| | | || ||| ||||| | || || | | | Sbjct 140550 TTGTCCATAAAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTTGCCAAGAGCCACA 140491 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||| |||||||| || ||||||||||| || |||||||| || |||||| || | Sbjct 140490 AGCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGAGTTCATTCCAAGC 140431 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 || || || || | ||| ||| || || ||||| || || || ||||| Sbjct 140430 AGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAACTGCCTC 140378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106886851099775