Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2726 149 6e-31 seq2473 93.3 4e-14 >seq2726 Length=527079 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| || ||||| ||||||||||| | ||||| ||| || || Sbjct 136736 ATGCAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCC 136677 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | |||||| || || ||||| || |||||||| || || |||||| Sbjct 136676 GACACAATCGACAATGTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATCAA 136617 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| |||||||| || || || |||||| | | | || ||||| || Sbjct 136616 CAACGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAAT 136557 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| || ||||| || ||| | || | || ||||| || || Sbjct 136556 ATTCAAAAAGAGTCGACTCTGCACCTTGTCCTTCGCTTGCGTGGTGG 136510 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || ||||| || ||||| ||||| || | | Sbjct 136508 ATGCAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCG 136449 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || || | ||| ||||| ||| ||||| |||||||| || || || || || Sbjct 136448 GACACAATCGACAATGTTAAGACAAA-GATTCAAGATAAAGAAGGTATTCCACCAGACCA 136390 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| | ||||||||||| || ||||| || ||| | | | || |||||||| Sbjct 136389 GCAACGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAA 136330 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| || ||| || || |||||||||||| ||||||| || || Sbjct 136329 CATTCAGAAAGAAAGCACTCTGCACTTGGTGTTGAGATTGCGTGGTGG 136282 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || | Sbjct 137268 ACCATGCAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCT 137209 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||||||||| || || || ||||| || Sbjct 137208 AGTGACACTATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGAC 137149 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || ||||| ||||||||||| || |||||||| || ||| ||| | | || || || Sbjct 137148 CAGCAACGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTAC 137089 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| || || || |||||||| Sbjct 137088 AACATTCAGAAGGAGTCTACCCTTCACTTGGT 137057 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || ||||| || || || || || || || || | | || || | || ||| Sbjct 136949 AAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCGACAAC 136890 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | || || || ||| || ||||| ||||| || ||||| || || ||||||||||| || Sbjct 136889 GTGAAGACCAA-GATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGATTTT 136831 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||||| || ||||| ||||| | | | || ||||||||||||||||||||||| Sbjct 136830 CGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGGAATC 136771 Query 24898 GACACTACA-CTTGGTGTTGCGATTGCGCGGAGG 24930 || || || |||| | || || | ||||| || Sbjct 136770 TACTCTTCATCTTGTTCTT-CGTCTCCGCGGTGG 136738 >seq2473 Length=337605 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 126259 ATTGAAAAGGAATTCTTTACGTCGGCGCTGCCATGCGATATGTTGGGAATGAATTCTACA 126318 ||||| ||||||||||| || || || || || | | || | |||||||| || | | Sbjct 140390 ATTGAGAAGGAATTCTTGACCGATGCCCTCCCTTGTGCTCTGCTTGGAATGAACTCCA-A 140448 Query 126319 GC-GATGTGCGAATATATAGAGTTCGTAGCGGACCGTTTGCTCGTCGAATTACGACAACC 126377 || ||||| |||| || |||||||| || ||||| ||||| || | | | |||| Sbjct 140449 GCTCATGTGTCAATACATCGAGTTCGTTGCCGACCGGTTGCTTGT-GGCTCTTGGCAACA 140507 Query 126378 GAAA-CACTTTAATACACCCAATCCATTTAACTTTATGAACAATATTTCTCTCGAGGGAA 126436 ||| || |||| | | || ||||| |||||||| ||||||| || || | || | Sbjct 140508 AAAAGTTCTATAATGCCACTAACCCATTCGACTTTATGGACAATATCTCGCTGGCTGGTA 140567 Query 126437 AGACTAACTTTTTCGAGAGACGTGTCGGAGAGTA 126470 |||| ||||| || |||| ||||| || || || Sbjct 140568 AGACCAACTTCTTTGAGAAGCGTGTTGGTGATTA 140601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449880307061000