Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2726 132 3e-26 seq1061 98.7 6e-16 >seq2726 Length=527079 Score = 132 bits (146), Expect = 3e-26 Identities = 161/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||||||||| ||||| || ||| | || |||| Sbjct 137054 AGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCT 137113 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || || ||||||| ||||||||||| | || | ||||||||||| Sbjct 137114 TCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 137173 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || |||| || ||| | | ||| || || | ||| || Sbjct 137174 TGGATCTTGGTCTTGAC--AT--TATCAATAGTGTCACTAGACTCCACCTCGAGGGTGAT 137229 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||||||| |||||||| || |||||||||||| Sbjct 137230 GGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCATG 137266 Score = 105 bits (116), Expect = 4e-18 Identities = 168/236 (71%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 ||| || || | ||| |||| |||| ||| | ||||| || |||||||||||||| || Sbjct 136278 ATTACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATC 136337 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || || | || |||| || || ||||||||||| ||||| ||||||||||||||| | Sbjct 136338 GGAAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGG 136397 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGGATGCTATCGAT----TCATTG 34921 || | || || || || || | | ||||| || || || | ||||| || Sbjct 136398 TGGAATACCTTCTTTATC-TTGAATCTTTGTCTTAAC--AT--TGTCGATTGTGTCCGAT 136452 Query 34922 GCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||| || || | || || || ||||| ||||| || || || || |||||||| Sbjct 136453 GACTCAACTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||||||||| || || || |||| | || || || ||||| |||||||| Sbjct 136774 TCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAA 136833 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||||||||| | || | || |||||||| | || || || ||| Sbjct 136834 ATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTCACGTTG 136893 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| | ||| || |||| ||| ||||||||||| || || ||||| || Sbjct 136894 TCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGAC 136952 >seq1061 Length=321426 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||||||||| || || || || |||| | || Sbjct 107729 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCC 107788 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||| || || ||||||||| | || | ||||||||||| Sbjct 107789 TCGAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 107847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325680594153425