Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2726 125 6e-24 >seq2726 Length=527079 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| | || |||||| || || ||| |||||| |||||||||||||| | | Sbjct 136282 CCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAA 136341 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || || || ||| | || | || |||||| || || ||| Sbjct 136342 AGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGA 136401 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| ||||| ||| ||||| || ||| | || | ||||| || || || Sbjct 136402 ATACCTTCTTTATCTTG-AATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAAC 136460 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||| ||||| | ||||| || || |||||||| Sbjct 136461 TTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| || || || | || || || || ||||||||||| || ||||| | Sbjct 136510 CCACCACGCAAGCGAAGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAG 136569 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || ||||| || || ||| | ||||| | ||| ||||| |||||| Sbjct 136570 AGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGA 136629 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| |||||| | ||| ||| | || | ||||| || ||| || Sbjct 136630 ATTCCTTCCTTATCTTG-AATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAAC 136688 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || ||||||||||| || | |||||| || || || ||||| Sbjct 136689 TTCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | |||||| || ||||| ||||||||||||||||| | | ||||| Sbjct 136749 ACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCC 136808 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || ||||| || | ||||| | |||||| || || ||||| || || || Sbjct 136809 GTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTT 136868 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || || || || | || | ||| ||||| || || ||||| || | Sbjct 136869 GTCCTG-AATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGA 136927 Query 29750 TAGTTTTGCCAGT 29762 | || || || || Sbjct 136928 TGGTCTTTCCGGT 136940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385204763308575