Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2473 125 7e-24 seq2726 109 5e-19 seq2257 87.8 2e-12 seq2550 86.0 6e-12 seq1061 82.4 7e-11 >seq2473 Length=337605 Score = 125 bits (138), Expect = 7e-24 Identities = 345/519 (66%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || |||||||| ||||| || || || ||| ||| || |||| Sbjct 140605 CTGGTAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACCAGCCAGCGAGATATTGTC 140546 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTA-TTTCGGCTGGCCCAACTGT-ACGAGC 120468 |||||| ||||| ||||| | || ||| || | ||| | || |||| | || ||| Sbjct 140545 CATAAAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTTG--CCAAGAGCCACAAGC 140488 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 | ||||| || || ||||| ||||| | |||||| || | |||||| || |||| Sbjct 140487 AACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGAGTTCATTCCAAGCAGA 140428 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || || | || || || || ||||||||||| || || ||||| ||| ||| Sbjct 140427 GCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAACTGCCTCTGTGATAATG 140368 Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTG--TGTTCGATGCGCGTTCGGTAGTA-CAGGCAC 120645 || | |||| || || | | | ||||| || | | | |||||| Sbjct 140367 GC-----TTCAACGGCCTGGGGACTGGGCCGAT-GATGCATGTGAGAAAACAGCAGGCAG 140314 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 |||||||| ||||| || ||||| || || || |||| ||||| ||| || || || Sbjct 140313 GCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGAAAAGGTAAGACCA 140254 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765 ||||| | || | |||| | |||| |||| || ||| ||| ||||| | Sbjct 140253 GGCATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCCGCTGAAGAAAATT 140194 Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCGAT 120824 ||||| || |||||||| | || ||||| ||| || |||| || || | | ||| Sbjct 140193 CCCTCGACAGCAGCAAAGGCAATCAAGCGCTGGGCGAATGTCG-ATTCCTGATCCTGGAT 140135 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||| |||||||| || ||||| || || | ||| || Sbjct 140134 CCATCGAATGGCCCAGTCAGCCTTCTTACGAATGCAAGG 140096 >seq2726 Length=527079 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| || | || ||| | || || || Sbjct 137060 AAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCA-TCTTCAAG 137118 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | || | || |||||||| ||||||||||| |||||||| ||| Sbjct 137119 CTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGAT 137178 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | | |||||| |||| ||||| ||| || || Sbjct 137179 CTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTCTTTCC 137238 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||||| || || ||||| |||||||||| Sbjct 137239 CGTCAGGGTCTTGACGAAGATCTGCATGG 137267 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| |||| | || |||||||| ||||| ||||||||||| Sbjct 136809 GTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTT 136868 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||| | | || | || || | | |||||| || | ||||| Sbjct 136869 GTCCTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGAT 136928 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGA 133650 ||| || ||||| ||||| || |||| Sbjct 136929 GGTCTTTCCGGTAAGAGTCTTGACGA 136954 >seq2257 Length=132105 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCGTAAA 133530 || || ||||| ||||||| || || ||| ||| ||||||||||| || ||| | | Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGT--ACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGA 93740 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | || ||||| || || |||||||| |||||||| ||||| ||| | | | Sbjct 93739 TCAATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGT 93680 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | |||||| | | |||||| || | ||||| || |||||||| || || || |||| Sbjct 93679 CGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGA 93620 Query 133651 A 133651 | Sbjct 93619 A 93619 >seq2550 Length=338734 Score = 86.0 bits (94), Expect = 6e-12 Identities = 188/282 (67%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGG 149530 ||| ||||| |||||||| || |||||| | ||||| || || |||||| || Sbjct 314961 GTAAATGCCGTCGATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGG 315020 Query 149531 AAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCAT 149590 |||| || || ||| | |||||| || || || ||| |||||||| ||| Sbjct 315021 CTGGGGCGTTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACAT 315080 Query 149591 CATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCG 149650 || | || | ||| | | || || || || ||||| || || | || || || Sbjct 315081 CAAATTATAGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACG 315140 Query 149651 CATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTT 149710 ||| | ||| || ||||| ||||| || |||||| |||| ||| || || | Sbjct 315141 CATAATCATGTGTTGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCT 315200 Query 149711 TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 |||||||||||| | ||||| |||| ||||| ||| || || Sbjct 315201 CTCTAGTGTCTTGAATCCAAAATACTGGTAGTTAAAATCACG 315242 >seq1061 Length=321426 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || |||||||| | ||| ||||||||||||||| || Sbjct 107743 GGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACC 107802 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | || || ||||||||||| || || ||||| |||||||| Sbjct 107803 AGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 107847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483402218513000