Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2550 192 1e-43 >seq2550 Length=338734 Score = 192 bits (212), Expect = 1e-43 Identities = 460/692 (66%), Gaps = 9/692 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||| ||||| || || || | | |||||||| || | || ||| | | | Sbjct 315224 TATTTTGGATTCAAGACACTAGAGAGGTCATATTTACTCCGAATTAACGGCAAAGTTGCT 315165 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || ||||||||| || | |||||||| |||| ||||||||| | |||||| | Sbjct 315164 GAGCGCCCGCAACACATGATTATGCGTGTTGCAGTTGGAATTCATGGAGAGGATATTGAG 315105 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTAT---TCATGCTACTCCT 110480 | ||||| ||| || | | || | |||| | | ||||||| | || Sbjct 315104 AAGGCCATTGAGACCTATAATTTGAT--GTCCCA-GAAATTTTTCACTCATGCTTCACCC 315048 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 ||||| || ||||| ||||| |||| |||||||||| |||||| | | || Sbjct 315047 ACCCTTTTCAACGCGGGAACGCCCCAGCCACAAATGGCTTCTTGTTTTCTTATCGATATG 314988 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 || || ||| || || || ||||| ||| |||| || ||| || ||||| || Sbjct 314987 AAGGAAGATAGCATCGACGGCATTTACGATACTCTCAAGACTTGTGCGCTGATTTCCAAG 314928 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | |||| || |||||| || |||| ||| ||| || | | || | |||| ||| Sbjct 314927 ACAGCTGGTGGTATTGGTCTTAACGTCCATCGTATCCGAGCCACTGGCTCCTATATTGCA 314868 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || || |||| | |||| || | || ||| | | ||||| ||| | || || Sbjct 314867 GGCACAAATGGCTCTTCTAATGGAATTATACCTATGCTCCGTGTCTTTAACAATACCGCT 314808 Query 110721 AAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCT 110777 ||| || |||||||||| || | | ||| | || || ||||| || |||||| Sbjct 314807 CGATACGTTGATCAAGGTGGCAACAAACGGCCAGGCGCCTTCGCAATCTACCTTGAACCT 314748 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 |||||||| ||||| |||||||| | || ||||| || || || ||| |||||| Sbjct 314747 TGGCATTCCGATATCTTTGAATTTCTGGATCTTCGCAAGAACCACGGAAAGGAAGAAGTG 314688 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 ||||| |||||| | || ||| | |||| ||||||| ||||||||||| ||| | Sbjct 314687 AGAGCCCGTGATCTCTTCCTTGCTCTTTGGACCCCAGATTTGTTCATGAAACGAGTTGAG 314628 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 | || || ||| | | | ||||| || | || || | ||||||| ||| Sbjct 314627 AAGAACGGTGATTGGACCTTGTTCTGTCCGAATGAGGCGCCAGGGTTGGCTGATGTCTAT 314568 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 || | |||||||| | || || ||||| || Sbjct 314567 GGTGACGAGTTTGAGGCTCTCTATGAAAAGTA 314536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186766041430075