Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2726 147 5e-30 >seq2726 Length=527079 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| |||||||||||||| ||||||| || || |||||| |||| Sbjct 136493 AAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCGGACACAATCGACAAT 136434 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| |||||||| ||| || ||| ||| |||||||||| Sbjct 136433 GTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAGCAACGACTTATCTTT 136374 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | |||||||| |||| | ||||||| ||| | |||||||| Sbjct 136373 GCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAACATTCAGAAAGAAAGC 136314 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||||| ||| | || |||||| Sbjct 136313 ACTCTGCACTTGGTGTTGAGA 136293 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| || || |||||||| ||| || |||||| |||| Sbjct 136721 AAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCCGACACAATCGACAAT 136662 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| || |||||||| || ||||||||| ||| || ||| | | || || Sbjct 136661 GTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATCAACAACGTTTGATTTTT 136602 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | || ||||| | || | | |||||||| | || |||||||| Sbjct 136601 GCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAATATTCAAAAAGAGTCG 136542 Query 206365 ACTCTTCACCTTGT 206378 ||||| |||||||| Sbjct 136541 ACTCTGCACCTTGT 136528 Score = 84.2 bits (92), Expect = 5e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || ||||| || ||||| | || ||||| ||||| || |||| Sbjct 136950 CAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCGACAA 136891 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || ||||| ||| || ||| ||| | | || || Sbjct 136890 CGTGAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGATTTT 136831 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || | ||| | | ||||| ||| | || || || || Sbjct 136830 CGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGGAATC 136771 Query 206364 TACTCTTCACCTTGTT 206379 ||||||||| |||||| Sbjct 136770 TACTCTTCATCTTGTT 136755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181774238107075