Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2550 118 1e-21 seq2726 104 2e-17 >seq2550 Length=338734 Score = 118 bits (130), Expect = 1e-21 Identities = 217/318 (68%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 ||| |||||||||||||| || | || | | | | |||||| ||| |||||| || Sbjct 314961 GTAAATGCCGTCGATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGG 315020 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 |||||||||| |||||||||||| || || || || ||||| || ||| Sbjct 315021 CTGGGGCGTTCCCGCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACAT 315080 Query 148230 CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289 || ||| |||||||| || | || || || || || ||||| || | || || || Sbjct 315081 CAAATTATAGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACG 315140 Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATT 148349 ||| | |||||| || || || || ||||||| ||| || ||| | |||| | Sbjct 315141 CATAATCATGTGTTGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCT 315200 Query 148350 TTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGC 148409 || || || ||| | ||||| |||| ||| | |||||| | || || | ||||||| Sbjct 315201 CTCTAGTGTCTTGAATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGA 315260 Query 148410 ATCTAGTGTCTCAGCATG 148427 | ||| ||||||||| Sbjct 315261 GTTAAGTTCCTCAGCATG 315278 >seq2726 Length=527079 Score = 104 bits (114), Expect = 2e-17 Identities = 161/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTA---TGTTTGACTCTTTTTGAATGTTGTAGTCGCTCAT 131958 |||||| | ||| ||||| || | || || ||||| |||||||| || ||| | Sbjct 136287 ACGCAATCTCAACACCAAGTGCAGAGTGCTT---TCTTTCTGAATGTTATAATCGGAAAG 136343 Query 131959 GGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTAT 132018 || || |||||| ||||| || |||| | |||| || || || || ||||| || || Sbjct 136344 CGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAAT 136403 Query 132019 GCCTTCTTTATCGGTAATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTT 132077 ||||||||||| | | | ||||| | ||| | || | || || | | ||| |||| Sbjct 136404 ACCTTCTTTATC-TTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAACTT 136462 Query 132078 CGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | | ||| | |||||| ||||| || ||||| | |||||||||||| Sbjct 136463 CCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||||||| | || | || | | |||||||||||||| ||||| || | || Sbjct 136515 ACGCAAGCGAAGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGT 136574 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| || || || || |||| | | || | ||| ||||||||||| || || || Sbjct 136575 ACGGCCATCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCC 136634 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| ||||| |||||| ||| | | || | || |||| | || ||||| | Sbjct 136635 TTCCTTATCTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAA 136694 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| || ||||| ||||| | |||||| ||||| Sbjct 136695 TGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | |||||| || | | | ||||| || |||||||||||||| | ||| Sbjct 137044 ACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGT 137103 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||||||||| | | |||| | || || || || ||||| ||||| Sbjct 137104 TCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCC 137163 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | ||| || | | |||||| |||| Sbjct 137164 CTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAG 137223 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || || ||||| || || | ||| ||||||||| Sbjct 137224 GGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCATG 137266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476592880257000