Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2473 127 3e-23 seq635 86.0 9e-11 >seq2473 Length=337605 Score = 127 bits (140), Expect = 3e-23 Identities = 215/304 (71%), Gaps = 7/304 (2%) Strand=Plus/Plus Query 1455771 AGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTC 1455830 ||| ||| ||| |||||||| |||||| |||| || ||||| ||||| || || || || Sbjct 139692 AGCAGATTTGGCAAATGTACAAAAAAG-CCGAAGCATCCTTCTGGACTGCTGAAGAAATC 139750 Query 1455831 GACCTCGGCGCCGA-CACGGTCCACTGGGTG--TCG-CTGAGCGACGACGAGCGCCATTT 1455886 || | | || | | | ||||| ||| |||| |||||| || ||| | || Sbjct 139751 GATTTGTCCAAAGATCTCCATG-ACTGGAACCATCGACTGAACGACGATGAACGCTACTT 139809 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| | |||||| ||||| || ||||||| |||||||||||| ||||| || | Sbjct 139810 CATCTCTCGCGTCCTGGCCTTCTT-CGCCGCCTCCGATGGCATCGTCAATGAGAATCTTG 139868 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 || | || | || || || | |||||||| |||| |||||||| ||||||| Sbjct 139869 TCGAGAGATTCAGCGCTGAAGTTCAGATTCCAGAGGCTCGTTGCTTTTACGGATTCCAGA 139928 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || || ||||| || || || ||||| ||||| || ||||| ||| |||||| Sbjct 139929 TCATGATGGAGAATATCCATTCCGAGACATACTCTCTCCTCATTGACACGTACATCAAGG 139988 Query 1456067 ACCC 1456070 | || Sbjct 139989 AACC 139992 >seq635 Length=3636 Score = 86.0 bits (94), Expect = 9e-11 Identities = 144/200 (72%), Gaps = 9/200 (5%) Strand=Plus/Minus Query 2144665 GCTCGAC-CTCGCGGGCATGGTCATGGCCAGCGACGCCTACTTTCCCTTTCCCGACGGCC 2144723 ||| ||| ||||| || | || |||||||||| || | ||| || || | |||||||| Sbjct 1212 GCTTGACGCTCGCCGGGAGCGTGGTGGCCAGCGATGCGTTCTTCCCGTTCCGCGACGGCC 1153 Query 2144724 CGAGCAAGGCCATCGCCGGCGGCGTCGTCGC-CATCGTGCAGCCGGGCGGC-TCACGCG- 2144780 | | || | | | ||||| | ||| | ||| ||||||||||||| || ||| Sbjct 1152 TGGACGTGGTGGTGGATGCCGGCGCC-TCGTGCGTCGCGCAGCCGGGCGGCAGCATGCGT 1094 Query 2144781 GCGGCGACAAGCCTCGATCGCCGTCTGCGACGAGGCCGGCGTCGCCATGGTCTTTACCGG 2144840 | ||| ||| |||||||| | ||||||| |||||| || |||||||| ||||| Sbjct 1093 GATGCG-GAAG---TGATCGCCGCCGCCGACGAGCGCGGCGTGGCGATGGTCTTCACCGG 1038 Query 2144841 CATGCGCCATTTCCGTCACT 2144860 | ||||||| ||||| |||| Sbjct 1037 CGTGCGCCACTTCCGCCACT 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177514610598150