Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2726 125 6e-24 seq2257 95.1 1e-14 >seq2726 Length=527079 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| ||||||||||| || | | |||||| | || || Sbjct 137057 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCTTCA 137116 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| ||||| ||||| ||||| || |||||||| | ||| | || ||||||||| | Sbjct 137117 AGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGG 137176 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | | ||||| || || |||||||| | ||||| || || Sbjct 137177 ATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTCTTT 137236 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || || || || |||||||| Sbjct 137237 CCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565 ||| |||||||| || ||||||||||| || | || || || || |||||||| ||||| Sbjct 136278 ATTACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATC 136337 Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625 || | || || | || || |||||||| || ||||| || | || |||||||| | Sbjct 136338 GGAAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGG 136397 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTC 35685 |||| | || || || |||||| ||| | | | | | ||||| || || Sbjct 136398 TGGAATACCTTCTTTATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTC 136457 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| |||||||||||| || || | |||||||| || |||||||| Sbjct 136458 AACTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||| ||||| | | || || |||| || |||||||| || || || Sbjct 136774 TCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAA 136833 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || |||||||| | ||||| || ||||||||| ||||| ||||| ||| Sbjct 136834 ATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTCA-CGTT 136892 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || || |||||||| | ||||| || || || || | ||| || || Sbjct 136893 GTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGAC 136952 >seq2257 Length=132105 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 ||||||| || || |||||| ||| || || |||| || |||||||| || || || | Sbjct 93799 CCTTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGA 93740 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| || ||||| || | || | || ||||||||| ||||| ||||| | | Sbjct 93739 TCAATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGT 93680 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||||||||| |||||||| | ||||| || || || || | || || || | Sbjct 93679 CGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGA 93620 Query 35727 A--TATCTGCA 35735 | ||| |||| Sbjct 93619 AGCTATTTGCA 93609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450776272621000