Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2726 134 1e-26 seq2550 84.2 2e-11 seq1061 82.4 8e-11 >seq2726 Length=527079 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || || |||||||| ||||| || | || | || || Sbjct 136528 ACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCA 136587 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || |||||||||||||| || ||||| ||||| || ||||| || |||||| Sbjct 136588 AGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGA 136647 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || ||| | ||||||||| ||||| || || | ||||| ||||| Sbjct 136648 ATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTG 136707 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||||| |||||||||||||| Sbjct 136708 CCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 Score = 113 bits (124), Expect = 5e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || || ||||||||||||||||| || || Sbjct 136738 CCACCGCGGAGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAG 136797 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || ||||||||||| ||||| || || || Sbjct 136798 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGA 136857 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| || || || ||| | || || || || ||||| Sbjct 136858 ATGCCTTCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACC 136917 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 || || || ||||| || ||||| | ||| || |||| Sbjct 136918 TCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGA 136954 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || || ||||| |||||||||||||| | Sbjct 137039 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAA 137098 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || |||||||| || ||||| ||||| || ||||| || || || Sbjct 137099 AGGGTTCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGG 137158 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| || | ||||| || ||||| Sbjct 137159 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACC 137218 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | || || ||||| || ||||| Sbjct 137219 TCGAGGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 >seq2550 Length=338734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 192/284 (68%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 7536 AATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCAT 7595 ||| |||||| || || || || ||||||||| | |||| || || || || || Sbjct 315183 AATTAACGGCAAAGTTGCTGAGCGCCCGCAACACATGATTATGCGTGTTGCAGTTGGAAT 315124 Query 7596 TCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTT 7655 ||| || || || ||||| ||| | || || || | ||||||| |||| || Sbjct 315123 TCATGGAGAGGATATTGAGAAGGCCATTGAGACCTATAATTTGATGTCCCAGAAATTTTT 315064 Query 7656 TACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTG 7715 || || ||||| |||||| | || |||||| || | ||| ||| || | || || Sbjct 315063 CACTCATGCTTCACCCACCCTTTTCAACGCGGGAACGCCCCAGCCACAAATGGCTTCTTG 315004 Query 7716 TTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TT 7774 |||| | | ||| ||||| |||||||||||||||||| | || || | || || Sbjct 315003 TTTTCTTATCGATATGAAGGAAGATAGCATCGACGGCATTTACGATACTCT-CAAGACTT 314945 Query 7775 GCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGT 7817 | || |||||| || || || || || || ||||| ||||| Sbjct 314944 GTGCGCTGATTTCC-AAGACAGCTGGTGGTATTGGTCTTAACGT 314902 >seq1061 Length=321426 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| ||||||||||| || | Sbjct 107714 CCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAA 107773 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | ||||||||| || || || Sbjct 107774 AGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGA 107833 Query 134607 ATGCCTTCTTTTTCT 134621 ||||| || || ||| Sbjct 107834 ATGCCCTCCTTGTCT 107848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505378973749000